RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ANAPC16Q96DE5 110 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 TCTN2Q96GX1 697 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 IER2Q9BTL4 223 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 COLEC11Q9BWP8 271 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 PRMT8Q9NR22 394 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 SUCOQ9UBS9 1254 aaKnown RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 PIN4Q9Y237 131 aaKnown RBP5.39□□□□□ -1.55
ATXN3-247ENST00000557311 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CEP250Q9BV73 2442 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CNTNAP2Q9UHC6 1331 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF292O60281 2723 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
ATXN3-247ENST00000557311 KMT2BQ9UMN6 2715 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 IGKV6-21A0A0C4DH24 114 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 hCG_1984214I3L0E3 225 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 MAN2B1O00754 1011 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TNFRSF10CO14798 259 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PRC1O43663 620 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 POMCP01189 267 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TDGF1P13385 188 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TCF3P15923 654 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 GUCY2CP25092 1073 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SFNP31947 248 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 MCM5P33992 734 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 CNR2P34972 360 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TRHRP34981 398 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 LIMK1P53667 647 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PTH1RQ03431 593 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 DRP2Q13474 957 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 AUHQ13825 339 aaKnown RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SLC14A2Q15849 920 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 LPAL2Q16609 132 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 GAB4Q2WGN9 574 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 JAKMIP3Q5VZ66 844 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 WWC2Q6AWC2 1192 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 UNC5AQ6ZN44 842 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PRR23BQ6ZRT6 265 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TPRG1Q6ZUI0 275 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TMTC3Q6ZXV5 915 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 APBB1IPQ7Z5R6 666 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF655Q8N720 491 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 ZNF713Q8N859 430 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 CRYGNQ8WXF5 182 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 FGF13Q92913 245 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 LIN37Q96GY3 246 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 MBOAT7Q96N66 472 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PHF20Q9BVI0 1012 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 CDADC1Q9BWV3 514 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 MARCH5Q9NX47 278 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 DONSONQ9NYP3 566 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SUCLA2Q9P2R7 463 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 GPR160Q9UJ42 338 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TCFL5Q9UL49 500 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PRG3Q9Y2Y8 225 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-247ENST00000557311 TAF6LQ9Y6J9 622 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
ATXN3-247ENST00000557311 SIGLEC6O43699 453 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 MARCH6O60337 910 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-247ENST00000557311 TADA2AO75478 443 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 ECI2O75521 394 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 GLI1P08151 1106 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 POU2F2P09086 479 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 ITGA4P13612 1032 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 RXRAP19793 462 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 HOXA9P31269 272 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-247ENST00000557311 CIITAP33076 1130 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 CXCL12P48061 93 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 CCR3P51677 355 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 JAK3P52333 1124 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 PRKCEQ02156 737 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 NUCB1Q02818 461 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 DSC1Q08554 894 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 NCBP1Q09161 790 aaKnown RBP5.37□□□□□ -1.55
ATXN3-247ENST00000557311 TCEAL1Q15170 157 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 BBS9Q3SYG4 887 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 PRR16Q569H4 304 aa5.37□□□□□ -1.55
ATXN3-247ENST00000557311 CT47A1Q5JQC4 288 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-247ENST00000557311 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms