RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NCAM1P13591 858 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 TCF3P15923 654 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 CYP2F1P24903 491 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 ADSSP30520 456 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 NTSR1P30989 418 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 EIF2DP41214 584 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 GRK6P43250 576 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 CSNK1EP49674 416 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 AAMPQ13685 434 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 RTP5Q14D33 572 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 PKDCCQ504Y2 493 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 C10orf76Q5T2E6 689 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 WSCD1Q658N2 575 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 PHTF2Q8N3S3 785 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 TOE1Q96GM8 510 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 JAKMIP1Q96N16 626 aaKnown RBP13.47□□□□□ -0.25
PSEN1-220ENST00000557037 LGMNQ99538 433 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 TMEM134Q9H6X4 195 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 FTSJ1Q9UET6 329 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
PSEN1-220ENST00000557037 SCN1AP35498 2009 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 CYB561D2O14569 222 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 CPLX1O14810 134 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 TRIM66O15016 1216 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 ADH1CP00326 375 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 CD6P30203 668 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 MATR3P43243 847 aaKnown RBP eCLIP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 DCAF12L1Q5VU92 463 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 C9orf57Q5W0N0 161 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 TTC9Q92623 222 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 MED8Q96G25 268 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 TRMT2BQ96GJ1 504 aaKnown RBP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 NRSN2Q9GZP1 204 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 PLEKHA5Q9HAU0 1116 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 SMPD4Q9NXE4 827 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 ANKMY1Q9P2S6 941 aa13.46□□□□□ -0.25
PSEN1-220ENST00000557037 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
PSEN1-220ENST00000557037 UTP20O75691 2785 aaKnown RBP13.45□□□□□ -0.26
PSEN1-220ENST00000557037 CBX4O00257 560 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 WNT7AO00755 349 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 TRIM24O15164 1050 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 NFICP08651 508 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 ACTN2P35609 894 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
PSEN1-220ENST00000557037 IL9RQ01113 521 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 PPP2R3AQ06190 1150 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 LY6G5CQ5SRR4 150 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 HES3Q5TGS1 186 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 ERICH1Q86X53 443 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 ENGASEQ8NFI3 743 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
PSEN1-220ENST00000557037 MRGPRX1Q96LB2 322 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 MYRFLQ96LU7 910 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 CD248Q9HCU0 757 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 ARHGAP28Q9P2N2 729 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 DSEQ9UL01 958 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 HEMK1Q9Y5R4 338 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-220ENST00000557037 SNX11Q9Y5W9 270 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 SLCO1B1Q9Y6L6 691 aa13.45□□□□□ -0.26
PSEN1-220ENST00000557037 TMEM131Q92545 1883 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 NBASA2RRP1 2371 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 SLC9A3R1O14745 358 aaPredicted RBP13.44□□□□□ -0.26
PSEN1-220ENST00000557037 SLC16A4O15374 487 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 XPOTO43592 962 aaKnown RBP13.44□□□□□ -0.26
PSEN1-220ENST00000557037 NEMFO60524 1076 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 TOM1L1O75674 476 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 CLTAP09496 248 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 TMPRSS3P57727 454 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 DNAJC3Q13217 504 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 NR5A1Q13285 461 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 SPATA1Q5VX52 437 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 SDE2Q6IQ49 451 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 CHPFQ8IZ52 775 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 FAM177A1Q8N128 213 aaPredicted RBP13.44□□□□□ -0.26
PSEN1-220ENST00000557037 FSIP1Q8NA03 581 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 KCNV2Q8TDN2 545 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
PSEN1-220ENST00000557037 HAPLN2Q9GZV7 340 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
PSEN1-220ENST00000557037 CLDN3O15551 220 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 TULP3O75386 442 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 TSPY1Q01534 308 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
PSEN1-220ENST00000557037 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 TBC1D25Q3MII6 688 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 BROXQ5VW32 411 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms