RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ZNF77Q15935 545 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 SPOPLQ6IQ16 392 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 PAQR9Q6ZVX9 377 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ZC3H3Q8IXZ2 948 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ADSSL1Q8N142 457 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 SPEM1Q8N4L4 309 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TTC8Q8TAM2 541 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 TAS1R2Q8TE23 839 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 NELL1Q92832 810 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ELMO3Q96BJ8 720 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 DHTKD1Q96HY7 919 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 SLC22A12Q96S37 553 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 HPS4Q9NQG7 708 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 PRMT8Q9NR22 394 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ZSCAN32Q9NX65 697 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 DUS2Q9NX74 493 aaKnown RBP9.26□□□□□ -0.93
ACTN1-213ENST00000554508 IL37Q9NZH6 218 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 ARHGAP26Q9UNA1 814 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 PCDHGA2Q9Y5H1 932 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 R4GN57 208 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 RALGAPA1Q6GYQ0 2036 aa9.26□□□□□ -0.93
ACTN1-213ENST00000554508 MYO16Q9Y6X6 1858 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 C2orf78A6NCI8 922 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
ACTN1-213ENST00000554508 TNFRSF10BO14763 440 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 AP1G2O75843 785 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 CXCL12P48061 93 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 IFNAR2P48551 515 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 MXI1P50539 228 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 SLC7A9P82251 487 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 CCINQ13939 588 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 PON2Q15165 354 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 SNX30Q5VWJ9 437 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 ANKRD40Q6AI12 368 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 CPA6Q8N4T0 437 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 ZBTB44Q8NCP5 570 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 FBXL13Q8NEE6 735 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 SLC2A14Q8TDB8 520 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 SH3RF2Q8TEC5 729 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 ATRIPQ8WXE1 791 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 ATP2A3Q93084 1043 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 CYFIP2Q96F07 1278 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 KCNK16Q96T55 309 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 HNRNPABQ99729 332 aaKnown RBP9.25□□□□□ -0.93
ACTN1-213ENST00000554508 NIF3L1Q9GZT8 377 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 FBXO44Q9H4M3 255 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 EBF3Q9H4W6 596 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 MMRN2Q9H8L6 949 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 ECT2Q9H8V3 914 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 APOBEC3GQ9HC16 384 aaKnown RBP9.25□□□□□ -0.93
ACTN1-213ENST00000554508 CSNK1G1Q9HCP0 422 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 TMEM30AQ9NV96 361 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 RAB20Q9NX57 234 aa9.25□□□□□ -0.93
ACTN1-213ENST00000554508 EP300Q09472 2414 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-213ENST00000554508 MYO18AQ92614 2054 aaKnown RBP9.25□□□□□ -0.93
ACTN1-213ENST00000554508 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 SPAG17Q6Q759 2223 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 FAM92AA1XBS5 289 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 LEFTY2O00292 366 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 SLC9A3R1O14745 358 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 PSMA7O14818 248 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 CILPO75339 1184 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 PAPSS2O95340 614 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 NFATC1O95644 943 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 OLFM2O95897 454 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 ABL1P00519 1130 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 OAS1P00973 400 aaKnown RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 FAM200BP0CF97 657 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 CCDC130P13994 396 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 ARSAP15289 507 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 DRD1P21728 446 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 GJA4P35212 333 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 GRSF1Q12849 480 aaKnown RBP eCLIP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 IFRD2Q12894 506 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 EML3Q32P44 896 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 TMEM196Q5HYL7 178 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 HECTD3Q5T447 861 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 FOXR2Q6PJQ5 311 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 DDX42Q86XP3 938 aaKnown RBP eCLIP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 RIN3Q8TB24 985 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
ACTN1-213ENST00000554508 FBXO32Q969P5 355 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 SMOQ99835 787 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 RNF38Q9H0F5 515 aa9.24□□□□□ -0.93
ACTN1-213ENST00000554508 METTL14Q9HCE5 456 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms