RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PSMC1P62191 440 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 BEX3Q00994 111 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 PTK7Q13308 1070 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 KLF1Q13351 362 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 PDCLQ13371 301 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF211Q13398 564 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SLMAPQ14BN4 828 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SIX1Q15475 284 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 FAM26DQ5JW98 314 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 UBXN11Q5T124 520 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 DENND1BQ6P3S1 775 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RNF180Q86T96 592 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM110Q86TL2 294 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 XYLT1Q86Y38 959 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 CCDC105Q8IYK2 499 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 IQCKQ8N0W5 287 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 CCDC89Q8N998 374 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 KLHDC9Q8NEP7 349 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 TRPV1Q8NER1 839 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 APPL2Q8NEU8 664 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ATL2Q8NHH9 583 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 TRIB2Q92519 343 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 EXOC4Q96A65 974 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 HSFY1Q96LI6 401 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 MCEEQ96PE7 176 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 FMO2Q99518 471 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SH3GL2Q99962 352 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 OSBPL8Q9BZF1 889 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SENP6Q9GZR1 1112 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 NXF3Q9H4D5 531 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 PRDM16Q9HAZ2 1276 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 WHRNQ9P202 907 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 GIT1Q9Y2X7 761 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 IPPQ9Y573 584 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SNX9Q9Y5X1 595 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 POLR2AP24928 1970 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 GOLGA6L10A6NI86 522 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 DAPK3O43293 454 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF189O75820 626 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 FGFR4P22455 802 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PSMA2P25787 234 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CTGFP29279 349 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ECHS1P30084 290 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 MAP2K2P36507 400 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 MARCKSL1P49006 195 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF143P52747 638 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 BCAT1P54687 386 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CDH8P55286 799 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PRKCZQ05513 592 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CACNB2Q08289 660 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 MGAT3Q09327 533 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM62Q0P6H9 643 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CALCOCO2Q13137 446 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TERF2Q15554 542 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TAZQ16635 292 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PTPROQ16827 1216 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PTPN20Q4JDL3 420 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TFDP3Q5H9I0 405 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 MAP3K21Q5TCX8 1036 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TWF2Q6IBS0 349 aaKnown RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CCSAPQ6IQ19 270 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 MRPL10Q7Z7H8 261 aaKnown RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 FAM228AQ86W67 206 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CCDC50Q8IVM0 306 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM86AQ8N2M4 240 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ANKRD52Q8NB46 1076 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 SLC35F5Q8WV83 523 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 RSPH1Q8WYR4 309 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PGBD4Q96DM1 585 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 UROC1Q96N76 676 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ZMAT2Q96NC0 199 aaKnown RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TBCBQ99426 244 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CNPY3Q9BT09 278 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 SNX25Q9H3E2 840 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TMEM51Q9NW97 253 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 SRRDQ9UH36 339 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CHORDC1Q9UHD1 332 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 TSPAN16Q9UKR8 245 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 DRG1Q9Y295 367 aaKnown RBP7.68□□□□□ -1.18
ATXN3-221ENST00000553498 PCDHGA11Q9Y5H2 935 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 CDY2AQ9Y6F7 541 aa7.68□□□□□ -1.18
ATXN3-221ENST00000553498 ESYT3A0FGR9 886 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 A8MXQ7 604 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 HMGB1P1B2RPK0 211 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 PPFIA2O75334 1257 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 CALCAP01258 141 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 KRT1P04264 644 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 ASGR1P07306 291 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 RHOQP17081 205 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 GPD1P21695 349 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 RFC1P35251 1148 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 GNL1P36915 607 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-221ENST00000553498 LHX1P48742 406 aa7.67□□□□□ -1.18
ATXN3-221ENST00000553498 TAS2R40P59535 323 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms