RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 BAHD1Q8TBE0 780 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 SPATA18Q8TC71 538 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 HCN2Q9UL51 889 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 TRABD2BA6NFA1 517 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 LEFTY2O00292 366 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 GRIA2P42262 883 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 MATR3P43243 847 aaKnown RBP eCLIP12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 SLC39A4Q6P5W5 647 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 DBX2Q6ZNG2 339 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 FILIP1Q7Z7B0 1213 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 PGBD3Q8N328 593 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 NECAB1Q8N987 351 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 TRIML1Q8N9V2 468 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 LSM14AQ8ND56 463 aaKnown RBP12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 ACBD6Q9BR61 282 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 ASB7Q9H672 318 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 ZDHHC4Q9NPG8 344 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
SUPT16H-202ENST00000552829 ATMQ13315 3056 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 KPNA7A9QM74 516 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 JAK2O60674 1132 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF883P0CG24 379 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 FOSBP53539 338 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 SLC7A9P82251 487 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 ATP2C1P98194 919 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 TSPY1Q01534 308 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 KCNB1Q14721 858 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 ETFBKMTQ8IXQ9 262 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 HSPA12BQ96MM6 686 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 RNF38Q9H0F5 515 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 PRORYQ9H606 182 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 CALCOCO1Q9P1Z2 691 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 RAI2Q9Y5P3 530 aa12.19□□□□□ -0.46
SUPT16H-202ENST00000552829 A0A1W2PQF6 199 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 H0YCG3 227 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 OLFM2O95897 454 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 LIG4P49917 911 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 PDE6CP51160 858 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 GRIK2Q13002 908 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 RESTQ13127 1097 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 ME3Q16798 604 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 CCDC142Q17RM4 750 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 INTS6LQ5JSJ4 861 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 HYIQ5T013 277 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 MARCH9Q86YJ5 346 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF843Q8N446 348 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 PDCL2Q8N4E4 241 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 DNASE2BQ8WZ79 361 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 BICD1Q96G01 975 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 MSTO1Q9BUK6 570 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
SUPT16H-202ENST00000552829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 HNRNPDLO14979 420 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF217O75362 1048 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 ATXN1LP0C7T5 689 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 MAGEA11P43364 429 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 POU5F1Q01860 360 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 BNC1Q01954 994 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 KDSRQ06136 332 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 TRIM29Q14134 588 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 IL17AQ16552 155 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 SV2CQ496J9 727 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 PHF12Q96QT6 1004 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 TTLL2Q9BWV7 592 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 FOXP1Q9H334 677 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 GTF3C4Q9UKN8 822 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 L1RE1Q9UN81 338 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 STARD13Q9Y3M8 1113 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
SUPT16H-202ENST00000552829 MYH10P35580 1976 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 MUC22E2RYF6 1773 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 E9PAM4 449 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 GABRDO14764 452 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms