RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SEZ6Q53EL9 994 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 EGFLAMQ63HQ2 1017 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 LAYNQ6UX15 382 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 LRRTM3Q86VH5 581 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 PHTF2Q8N3S3 785 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 C2orf15Q8WU43 125 aaKnown RBP12.17□□□□□ -0.46
GPN3-208ENST00000550974 SNX19Q92543 992 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 IGSF8Q969P0 613 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 PHF12Q96QT6 1004 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 HSD17B14Q9BPX1 270 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 HCN2Q9UL51 889 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 SLCO1B1Q9Y6L6 691 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 ABCA12Q86UK0 2595 aa12.17□□□□□ -0.46
GPN3-208ENST00000550974 NOTCH2Q04721 2471 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 CREBBPQ92793 2442 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 DENND4CQ5VZ89 1909 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 K7ERI5 159 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 SGSM2O43147 1006 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
GPN3-208ENST00000550974 ADH1CP00326 375 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 LRPAP1P30533 357 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 EFNA5P52803 228 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 SLC10A6Q3KNW5 377 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 LINC00303Q3SY05 128 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 CCDC81Q6ZN84 652 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 SENP8Q96LD8 212 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 ACO2Q99798 780 aaKnown RBP12.16□□□□□ -0.46
GPN3-208ENST00000550974 ARHGAP9Q9BRR9 750 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 SLC26A6Q9BXS9 759 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 OBSL1O75147 1896 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 ANK1P16157 1881 aa12.16□□□□□ -0.46
GPN3-208ENST00000550974 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 KCNJ18B7U540 433 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.46
GPN3-208ENST00000550974 ITGB6P18564 788 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 GUCY2FP51841 1108 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 PPP2R5AQ15172 486 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 DDR2Q16832 855 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 PADI6Q6TGC4 694 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 CLEC18BQ6UXF7 455 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 FAM26EQ8N5C1 309 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 DCBLD1Q8N8Z6 715 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 DEC1Q9P2X7 70 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 PCDHB5Q9Y5E4 795 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 KNTC1P50748 2209 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 MYLKQ15746 1914 aa12.15□□□□□ -0.46
GPN3-208ENST00000550974 CABIN1Q9Y6J0 2220 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 M0R2N6 131 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 LAD1O00515 517 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 SLC9A3R1O14745 358 aaPredicted RBP12.14□□□□□ -0.47
GPN3-208ENST00000550974 PPEF2O14830 753 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 NOL4O94818 638 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 ITGAVP06756 1048 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 MCF2P10911 925 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 GABREP78334 506 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 INSM1Q01101 510 aaPredicted RBP12.14□□□□□ -0.47
GPN3-208ENST00000550974 SMARCB1Q12824 385 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 KCNT1Q5JUK3 1230 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 LY6G5CQ5SRR4 150 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 PRAMEF14Q5SWL7 426 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 BTBD8Q5XKL5 378 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 CREB3L3Q68CJ9 461 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 LSMEM2Q8N112 164 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 CACTIN-AS1Q8N1I8 211 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 THEM5Q8N1Q8 247 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 EID2Q8N6I1 236 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 TERB1Q8NA31 727 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 TRMT2BQ96GJ1 504 aaKnown RBP12.14□□□□□ -0.47
GPN3-208ENST00000550974 GABRG3Q99928 467 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 RPF1Q9H9Y2 349 aaKnown RBP12.14□□□□□ -0.47
GPN3-208ENST00000550974 ITM2CQ9NQX7 267 aa12.14□□□□□ -0.47
GPN3-208ENST00000550974 USP36Q9P275 1121 aaKnown RBP12.14□□□□□ -0.47
GPN3-208ENST00000550974 TRIM24O15164 1050 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 PAPSS1O43252 624 aaPredicted RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 TULP3O75386 442 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 XRCC6P12956 609 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPN3-208ENST00000550974 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 LILRA4P59901 499 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 GAD2Q05329 585 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 SAFBQ15424 915 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPN3-208ENST00000550974 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 METTL23Q86XA0 190 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 VCPIP1Q96JH7 1222 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
GPN3-208ENST00000550974 TARS2Q9BW92 718 aaKnown RBP12.13□□□□□ -0.47
GPN3-208ENST00000550974 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms