RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ANTXRLA6NF34 631 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 RHOBTB1O94844 696 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 DGKEP52429 567 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 BMT2Q1RMZ1 405 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 TDRD10Q5VZ19 366 aaKnown RBP23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 FILIP1Q7Z7B0 1213 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 C12orf56Q8IXR9 622 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 TSTD1Q8NFU3 115 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 ZNF518BQ9C0D4 1074 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 PTPRDP23468 1912 aa23.1■■□□□ 1.29
SMARCC2-210ENST00000550519 BCLAF3A2AJT9 711 aaKnown RBP23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 CASP1P29466 404 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 ATICP31939 592 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 MYL6P60660 151 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 TRPC3Q13507 836 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 DHCR24Q15392 516 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 C2orf27AQ580R0 203 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 TCEAL6Q6IPX3 200 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 RASSF3Q86WH2 238 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 B3GALNT2Q8NCR0 500 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 TCEAL3Q969E4 200 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 SLITRK1Q96PX8 696 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 B3GNT5Q9BYG0 378 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 SMPD4Q9NXE4 827 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 CGNQ9P2M7 1197 aaKnown RBP23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 MMP17Q9ULZ9 603 aa23.09■■□□□ 1.29
SMARCC2-210ENST00000550519 A8MXQ7 604 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 CLDN5O00501 218 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 SLC9A3R1O14745 358 aaPredicted RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 POLR2DO15514 142 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 KRT37O76014 449 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 ABL1P00519 1130 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 KCNA4P22459 653 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 SEC13P55735 322 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 USP39Q53GS9 565 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 N4BP2L1Q5TBK1 243 aaPredicted RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 SYAP1Q96A49 352 aaPredicted RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 LSM14BQ9BX40 385 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 BLZF1Q9H2G9 400 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 VRTNQ9H8Y1 702 aa23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 NXF1Q9UBU9 619 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 MAP1BP46821 2468 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-210ENST00000550519 PVALEFA0A1B0GWK0 134 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 CAVIN2O95810 425 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 CHRM1P11229 460 aaPredicted RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 PMLP29590 882 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 EIF2DP41214 584 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 MRPS21P82921 87 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 CREB5Q02930 508 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 KNOP1Q1ED39 458 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 RHBDF2Q6PJF5 856 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 C11orf74Q86VG3 221 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 NUP93Q8N1F7 819 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 CNOT6LQ96LI5 555 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 TPSD1Q9BZJ3 242 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 SLC39A2Q9NP94 309 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 CFAP97Q9P2B7 532 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 INVSQ9Y283 1065 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 HELZP42694 1942 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 MYO16Q9Y6X6 1858 aa23.07■■□□□ 1.28
SMARCC2-210ENST00000550519 KIAA1549LQ6ZVL6 1849 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 YWHAQP27348 245 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 GBP1P32455 592 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 SLC6A11P48066 632 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 MESP2Q0VG99 397 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 CRY1Q16526 586 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 PMS2CLQ68D20 193 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 RNF43Q68DV7 783 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 DDX42Q86XP3 938 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 CCDC33Q8N5R6 958 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 PDZD8Q8NEN9 1154 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 PLEKHO2Q8TD55 490 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 OVCA2Q8WZ82 227 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 PNKPQ96T60 521 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 BACH2Q9BYV9 841 aa23.06■■□□□ 1.28
SMARCC2-210ENST00000550519 A0A0A0MRY4 1105 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 SCAMP3O14828 347 aaKnown RBP23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 EXOC3O60645 756 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 RTN3O95197 1032 aaPredicted RBP23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 MBL2P11226 248 aaPredicted RBP23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 CASP4P49662 377 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 CUL4BQ13620 913 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 ANO7Q6IWH7 933 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 TMEM92Q6UXU6 159 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 SFTPA1Q8IWL2 248 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 MDGA1Q8NFP4 955 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 PARD3BQ8TEW8 1205 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 KCNK16Q96T55 309 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 SMYD3Q9H7B4 428 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 IL37Q9NZH6 218 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 TBC1D14Q9P2M4 693 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 LAMA1P25391 3075 aa23.05■■□□□ 1.28
SMARCC2-210ENST00000550519 E2F8A0AVK6 867 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 PHACTR2O75167 634 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 HNRNPLP14866 589 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 CDH8P55286 799 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 CLDN10P78369 228 aa23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 IFRD2Q12894 506 aaPredicted RBP23.04■■□□□ 1.28
SMARCC2-210ENST00000550519 SNX30Q5VWJ9 437 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms