RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 SLC36A4Q6YBV0 504 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 C4orf50Q6ZRC1 276 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 ARMCX6Q7L4S7 300 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 ZNF720Q7Z2F6 126 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 SFTPA1Q8IWL2 248 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 BRSK2Q8IWQ3 736 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 CHCHD4Q8N4Q1 142 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
CDX2-202ENST00000548877 ADAMTS14Q8WXS8 1223 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 DUSP9Q99956 384 aaKnown RBP14.48□□□□□ -0.09
CDX2-202ENST00000548877 EHD2Q9NZN4 543 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 TRPM5Q9NZQ8 1165 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 ITGA11Q9UKX5 1188 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
CDX2-202ENST00000548877 ACACAQ13085 2346 aa14.48□□□□□ -0.09
CDX2-202ENST00000548877 ZNF840PA6NDX5 716 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.47□□□□□ -0.09
CDX2-202ENST00000548877 K7ELQ4 463 aaPredicted RBP14.47□□□□□ -0.09
CDX2-202ENST00000548877 ARHGAP33O14559 1287 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 GJB3O75712 270 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
CDX2-202ENST00000548877 ATXN3P54252 364 aaPredicted RBP14.47□□□□□ -0.09
CDX2-202ENST00000548877 NOP14P78316 857 aaKnown RBP14.47□□□□□ -0.09
CDX2-202ENST00000548877 SOWAHAQ2M3V2 549 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 EMC10Q5UCC4 262 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 DENND5BQ6ZUT9 1274 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 C12orf40Q86WS4 652 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 SCN4BQ8IWT1 228 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 ADGRF2Q8IZF7 708 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 TTC16Q8NEE8 873 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 POMGNT1Q8WZA1 660 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 RAD54LQ92698 747 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 CALML4Q96GE6 196 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 RNF38Q9H0F5 515 aa14.47□□□□□ -0.09
CDX2-202ENST00000548877 GCN1Q92616 2671 aaKnown RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 TBCAO75347 108 aaKnown RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 ADH1CP00326 375 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 CFIP05156 583 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 UBA7P41226 1012 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 USP46P62068 366 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 RBP5P82980 135 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 TFAMQ00059 246 aaKnown RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 ZNF33AQ06730 810 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 SCAPQ12770 1279 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 RESTQ13127 1097 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 MCM6Q14566 821 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 MAPRE1Q15691 268 aaKnown RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 SCARA3Q6AZY7 606 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 TRMT11Q7Z4G4 463 aaKnown RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 PDZD3Q86UT5 571 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 TTC30AQ86WT1 665 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 ETFBKMTQ8IXQ9 262 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 MINDY1Q8N5J2 469 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 HMGB4Q8WW32 186 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 OTUB2Q96DC9 234 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 ARHGEF4Q9NR80 690 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 BCCIPQ9P287 314 aaKnown RBP eCLIP14.46□□□□□ -0.09
CDX2-202ENST00000548877 TBC1D14Q9P2M4 693 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 MAGEC2Q9UBF1 373 aaPredicted RBP14.46□□□□□ -0.09
CDX2-202ENST00000548877 SIX4Q9UIU6 781 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 CDH9Q9ULB4 789 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 SNX9Q9Y5X1 595 aa14.46□□□□□ -0.09
CDX2-202ENST00000548877 PTPRBP23467 1997 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 ATXN2Q99700 1313 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 A0A1W2PQD8 194 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 TCRBV21S2A2A0A5A6 115 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 HCRTO43612 131 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 APC2O95996 2303 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 LDHAP00338 332 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 SYPP08247 313 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 GABRG2P18507 467 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 PLCG1P19174 1290 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 RPL6Q02878 288 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 DHX8Q14562 1220 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 CCNI2Q6ZMN8 369 aaPredicted RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 GLRX5Q86SX6 157 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 DDX42Q86XP3 938 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDX2-202ENST00000548877 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 KBTBD7Q8WVZ9 684 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 C8orf48Q96LL4 319 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 SYT15Q9BQS2 421 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 FAM213AQ9BRX8 229 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 GTPBP2Q9BX10 602 aaKnown RBP14.45□□□□□ -0.1
CDX2-202ENST00000548877 IKZF4Q9H2S9 585 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 CD248Q9HCU0 757 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 CRTAC1Q9NQ79 661 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 FSCN3Q9NQT6 498 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 SEL1LQ9UBV2 794 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 STARD13Q9Y3M8 1113 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 CPQQ9Y646 472 aa14.45□□□□□ -0.1
CDX2-202ENST00000548877 TRIM66O15016 1216 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 HOXC11O43248 304 aaPredicted RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 ATP2C2O75185 946 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 ADH5P11766 374 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 GARTP22102 1010 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms