RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 CPOXP36551 454 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 EPHB1P54762 984 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 NCKAP1LP55160 1127 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TMPRSS15P98073 1019 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 PLCB3Q01970 1234 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 GAD2Q05329 585 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 PTK7Q13308 1070 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 SLC30A10Q6XR72 485 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 FBXO36Q8NEA4 188 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 SEMA4DQ92854 862 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 GFM2Q969S9 779 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ZFRQ96KR1 1074 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 C7orf26Q96N11 449 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 IDI2Q9BXS1 227 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ARHGEF38Q9NXL2 777 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ZNF70Q9UC06 446 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 WDR37Q9Y2I8 494 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TELO2Q9Y4R8 837 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 IKBKGQ9Y6K9 419 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 CLRN2A0PK11 232 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 RAG1P15918 1043 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 EIF4BP23588 611 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 PCSK6P29122 969 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 PMLP29590 882 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 CCNIQ14094 377 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TLR1Q15399 786 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 MYLK3Q32MK0 819 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 FNBP1LQ5T0N5 605 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 DRICH1Q6PGQ1 229 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ALDH16A1Q8IZ83 802 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 MARVELD2Q8N4S9 558 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 XXYLT1Q8NBI6 393 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 JADE3Q92613 823 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TRIM11Q96F44 468 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 YIPF2Q9BWQ6 316 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 MRPS26Q9BYN8 205 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ADARB2Q9NS39 739 aaKnown RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ZNF711Q9Y462 761 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 ADAMTSL1Q8N6G6 1762 aa11.15□□□□□ -0.63
NPAS3-205ENST00000547068 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 CAPN8A6NHC0 703 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 CCNT2O60583 730 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 OATP04181 439 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SERPINA6P08185 405 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SREBF1P36956 1147 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 FDFT1P37268 417 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 NSFP46459 744 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 CD97P48960 835 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SLC18A2Q05940 514 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 BST1Q10588 318 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 MTM1Q13496 603 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SPDYE2Q495Y8 402 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 RABGAP1LQ5R372 815 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 KLHL35Q6PF15 583 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TSHZ1Q6ZSZ6 1077 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 ANO5Q75V66 913 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 PCGF5Q86SE9 256 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 NUP93Q8N1F7 819 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 ELMO3Q96BJ8 720 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 CCDC124Q96CT7 223 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 MECRQ9BV79 373 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 STRA6Q9BX79 667 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 Q9H521 79 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 HSPBP1Q9NZL4 362 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 DTNAQ9Y4J8 743 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 COPEO14579 308 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 DENRO43583 198 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 PEX1O43933 1283 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 PDE5AO76074 875 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 CACNB3P54284 484 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 PPIDQ08752 370 aaKnown RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 TCP10Q12799 353 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 RALGPS1Q5JS13 557 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 FNDC8Q8TC99 324 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
NPAS3-205ENST00000547068 ZBED3Q96IU2 234 aaPredicted RBP11.14□□□□□ -0.63
NPAS3-205ENST00000547068 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms