RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 CLDN5O00501 218 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 IKBKBO14920 756 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 MAPK13O15264 365 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 CALUO43852 315 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-209ENST00000546974 LRP3O75074 770 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 RNF40O75150 1001 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 RTN3O95197 1032 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-209ENST00000546974 NFATC1O95644 943 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 OLFM2O95897 454 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 P4HA1P13674 534 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 NDUFA8P51970 172 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 DLG4P78352 724 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 ARHGAP8P85298 464 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 ZXDBP98169 803 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 TAF10Q12962 218 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 LPAL2Q16609 132 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 RSPO4Q2I0M5 234 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-209ENST00000546974 ZACNQ401N2 412 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 DGLUCYQ7Z3D6 616 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 TAF4BQ92750 862 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-209ENST00000546974 RNF38Q9H0F5 515 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 SLC8A2Q9UPR5 921 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 TRAF3IP3Q9Y228 551 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 FRMD4BQ9Y2L6 1034 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
COL2A1-209ENST00000546974 EML5Q05BV3 1969 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 A0A1W2PQ27 194 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 A0A1W2PQ64 194 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 A0A1W2PQD8 194 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 RHOBTB3O94955 611 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 CLSTN1O94985 981 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 ABL1P00519 1130 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 OAS1P00973 400 aaKnown RBP15.28■□□□□ 0.04
COL2A1-209ENST00000546974 YWHAQP27348 245 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 RAP1GAPP47736 663 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 LMNB2Q03252 620 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 DPYDQ12882 1025 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 SRSF5Q13243 272 aaKnown RBP15.28■□□□□ 0.04
COL2A1-209ENST00000546974 NFIL3Q16649 462 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 CEP135Q66GS9 1140 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 NAIF1Q69YI7 327 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-209ENST00000546974 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 PAQR9Q6ZVX9 377 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 CAMKK1Q8N5S9 505 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 PDZD8Q8NEN9 1154 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 SDCBP2Q9H190 292 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 PARD6AQ9NPB6 346 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 USP18Q9UMW8 372 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 KIAA1549LQ6ZVL6 1849 aa15.28■□□□□ 0.04
COL2A1-209ENST00000546974 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 HOXC13P31276 330 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 SPEM2Q0P670 501 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 C1orf220Q5T0J3 134 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 CEP68Q76N32 757 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.27■□□□□ 0.04
COL2A1-209ENST00000546974 UNC93AQ86WB7 457 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 CRYBG2Q8N1P7 616 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 CCDC26Q8TAB7 109 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 KCNK16Q96T55 309 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 COMMD8Q9NX08 183 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 IL37Q9NZH6 218 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 CPQQ9Y646 472 aa15.27■□□□□ 0.04
COL2A1-209ENST00000546974 SLC9A3R1O14745 358 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 TNFRSF10BO14763 440 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ASS1P00966 412 aaKnown RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 VAMP7P51809 220 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ENPEPQ07075 957 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 IFRD2Q12894 506 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 SYT13Q7L8C5 426 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ACOT1Q86TX2 421 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 DDX42Q86XP3 938 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ADGRG2Q8IZP9 1017 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 GUF1Q8N442 669 aaKnown RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 RPLP0P6Q8NHW5 317 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 GAB3Q8WWW8 586 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 EZH1Q92800 747 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 FBXO32Q969P5 355 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ACDQ96AP0 544 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 ELMO3Q96BJ8 720 aa15.26■□□□□ 0.03
COL2A1-209ENST00000546974 DMAP1Q9NPF5 467 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-209ENST00000546974 MYO18AQ92614 2054 aaKnown RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 LAMA1P25391 3075 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 FAM92AA1XBS5 289 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 AP1G2O75843 785 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 AKAP3O75969 853 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 ZNF202O95125 648 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
COL2A1-209ENST00000546974 MBL2P11226 248 aaPredicted RBP15.25■□□□□ 0.03
COL2A1-209ENST00000546974 NR2F2P24468 414 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms