RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FAM92AA1XBS5 289 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 CDX4O14627 284 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-221ENST00000546229 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 TRIM66O15016 1216 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 ADAM23O75077 832 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 TNNC2P02585 160 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 EIF2DP41214 584 aaKnown RBP13.39□□□□□ -0.27
COPS7A-221ENST00000546229 SURF1Q15526 300 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
COPS7A-221ENST00000546229 RHBDF2Q6PJF5 856 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 ETFBKMTQ8IXQ9 262 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 ADGRG2Q8IZP9 1017 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 IL17RCQ8NAC3 791 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
COPS7A-221ENST00000546229 B3GNT5Q9BYG0 378 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 VRTNQ9H8Y1 702 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 CD248Q9HCU0 757 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 CPQQ9Y646 472 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 ZFYVE26Q68DK2 2539 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
COPS7A-221ENST00000546229 PATE3B3GLJ2 98 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 SGK1O00141 431 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CLDN5O00501 218 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
COPS7A-221ENST00000546229 GIPC1O14908 333 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 GREM1O60565 184 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CAVIN2O95810 425 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 FAM163BP0C2L3 166 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CASP1P29466 404 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 GRIK1P39086 918 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 SLC6A11P48066 632 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 PGFP49763 221 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 PDE6CP51160 858 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CLDN10P78369 228 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 TAF10Q12962 218 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 DHCR24Q15392 516 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 ELF2Q15723 593 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CRY1Q16526 586 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 SNX30Q5VWJ9 437 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 RNF43Q68DV7 783 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 B3GALNT2Q8NCR0 500 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 TSTD1Q8NFU3 115 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
COPS7A-221ENST00000546229 WBP2Q969T9 261 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 ELOVL4Q9GZR5 314 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 SDCBP2Q9H190 292 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 CUEDC2Q9H467 287 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 TRPM5Q9NZQ8 1165 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 MBD1Q9UIS9 605 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-221ENST00000546229 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
COPS7A-221ENST00000546229 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 ITPR1Q14643 2758 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 PPP6R2O75170 966 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 RHOBTB1O94844 696 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 P2RY2P41231 377 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 PPP3CCP48454 512 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 DGKEP52429 567 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 SEC13P55735 322 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 MYL6P60660 151 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 MRPS21P82921 87 aaKnown RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 CREB5Q02930 508 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 C2orf27AQ580R0 203 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 PEAR1Q5VY43 1037 aaPredicted RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 ANO7Q6IWH7 933 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 ALLCQ8N6M5 410 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 TTC16Q8NEE8 873 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 ZMIZ2Q8NF64 920 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 UPF2Q9HAU5 1272 aaKnown RBP13.37□□□□□ -0.27
COPS7A-221ENST00000546229 SMPD4Q9NXE4 827 aa13.37□□□□□ -0.27
COPS7A-221ENST00000546229 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
COPS7A-221ENST00000546229 C4orf47A7E2U8 309 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 CLIC2O15247 247 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 SPTLC2O15270 562 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 COCHO43405 550 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 STX6O43752 255 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 VNN1O95497 513 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 DLATP10515 647 aaKnown RBP13.36□□□□□ -0.27
COPS7A-221ENST00000546229 GNL1P36915 607 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-221ENST00000546229 CASP4P49662 377 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 NR1H3Q13133 447 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 MAP7D1Q3KQU3 841 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 FAM35AQ86V20 835 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 CCDC33Q8N5R6 958 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms