RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ZWILCHQ9H900 591 aa13.02□□□□□ -0.32
PAAF1-215ENST00000544909 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.32
PAAF1-215ENST00000544909 POLIQ9UNA4 740 aa13.02□□□□□ -0.32
PAAF1-215ENST00000544909 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.32
PAAF1-215ENST00000544909 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
PAAF1-215ENST00000544909 POC1B-GALNT4F8VUJ3 575 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 C2CD2LO14523 706 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 TRDMT1O14717 391 aaKnown RBP13.02□□□□□ -0.33
PAAF1-215ENST00000544909 TGDSO95455 350 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 ZFXP17010 805 aaPredicted RBP13.02□□□□□ -0.33
PAAF1-215ENST00000544909 FOXN2P32314 431 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
PAAF1-215ENST00000544909 GRM5P41594 1212 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 MSH2P43246 934 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 CLCN3P51790 818 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 CCNA1P78396 465 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 ARHGAP1Q07960 439 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 KCNJ11Q14654 390 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 HHATQ5VTY9 493 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 PALM2Q8IXS6 379 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
PAAF1-215ENST00000544909 LRRC52Q8N7C0 313 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 CEP120Q8N960 986 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 MCUQ8NE86 351 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SDCBP2Q9H190 292 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SMYD3Q9H7B4 428 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SAR1AQ9NR31 198 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 SLC45A1Q9Y2W3 748 aa13.02□□□□□ -0.33
PAAF1-215ENST00000544909 KLF11O14901 512 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 LGALS2P05162 132 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
PAAF1-215ENST00000544909 TROVE2P10155 538 aaKnown RBP eCLIP13.01□□□□□ -0.33
PAAF1-215ENST00000544909 CYP2C8P10632 490 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 ETS1P14921 441 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 KRT4P19013 534 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 CCND1P24385 295 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 DBN1Q16643 649 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 PKDCCQ504Y2 493 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 FAM133BQ5BKY9 247 aaKnown RBP13.01□□□□□ -0.33
PAAF1-215ENST00000544909 SLC9A4Q6AI14 798 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 CYS1Q717R9 158 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 TMEM110Q86TL2 294 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
PAAF1-215ENST00000544909 BANPQ8N9N5 519 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 SLC44A1Q8WWI5 657 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 RNF157Q96PX1 679 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
PAAF1-215ENST00000544909 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
PAAF1-215ENST00000544909 DHRS4L1P0CG22 281 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 INSRRP14616 1297 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 ARF4P18085 180 aaPredicted RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 RPA3P35244 121 aaPredicted RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 PTPN9P43378 593 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 NR2C2P49116 596 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 GDF10P55107 478 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 SLC18A2Q05940 514 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 ZKSCAN8Q15776 578 aaPredicted RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 SMTNL2Q2TAL5 461 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 LGSNQ5TDP6 509 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 ARHGAP17Q68EM7 881 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 FAM228AQ86W67 206 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 FBXO36Q8NEA4 188 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 OTUD5Q96G74 571 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 TWNKQ96RR1 684 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 CALN1Q9BXU9 219 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 KLC2Q9H0B6 622 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 EBF2Q9HAK2 575 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
PAAF1-215ENST00000544909 IKBKGQ9Y6K9 419 aa13□□□□□ -0.33
PAAF1-215ENST00000544909 STRNO43815 780 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ATP2C2O75185 946 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 TMEM63AO94886 807 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 CDH6P55285 790 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 CDK18Q07002 472 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 SEPT7Q16181 437 aaKnown RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 KCNT1Q5JUK3 1230 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 SCARA3Q6AZY7 606 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PRUNE1Q86TP1 453 aa12.99□□□□□ -0.33
PAAF1-215ENST00000544909 PSTKQ8IV42 348 aaKnown RBP12.99□□□□□ -0.33
PAAF1-215ENST00000544909 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms