RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CKMP06732 381 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 SP9P0CG40 484 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 CHRNB1P11230 501 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 BMP6P22004 513 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 TNK2Q07912 1038 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 TAF10Q12962 218 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 USP4Q13107 963 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 RUNX3Q13761 415 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 ZNF77Q15935 545 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 WDR44Q5JSH3 913 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 SLC2A14Q8TDB8 520 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 OSCP1Q8WVF1 389 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 DUSP9Q99956 384 aaKnown RBP14.76□□□□□ -0.05
VAMP1-208ENST00000544432 MMRN2Q9H8L6 949 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 LMAN1LQ9HAT1 526 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 HPS4Q9NQG7 708 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 SPATA6Q9NWH7 488 aaPredicted RBP14.76□□□□□ -0.05
VAMP1-208ENST00000544432 HMGXB4Q9UGU5 601 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 NDRG2Q9UN36 371 aaKnown RBP14.76□□□□□ -0.05
VAMP1-208ENST00000544432 COL4A3Q01955 1670 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 USP34Q70CQ2 3546 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 MIA3Q5JRA6 1907 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 OBSL1O75147 1896 aa14.76□□□□□ -0.05
VAMP1-208ENST00000544432 TICRRQ7Z2Z1 1910 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 MYO15AQ9UKN7 3530 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 OAS1P00973 400 aaKnown RBP14.75□□□□□ -0.05
VAMP1-208ENST00000544432 ZDHHC11BP0C7U3 371 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 AMPD2Q01433 879 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 LRRC32Q14392 662 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 MTF1Q14872 753 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 DGKKQ5KSL6 1271 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 ISM2Q6H9L7 571 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 TTI2Q6NXR4 508 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 SYNPOQ8N3V7 929 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 C12orf29Q8N999 325 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 TRIML1Q8N9V2 468 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 ZMIZ2Q8NF64 920 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 RIN3Q8TB24 985 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 FBXO32Q969P5 355 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 SLC35C1Q96A29 364 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 CYFIP2Q96F07 1278 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 TWNKQ96RR1 684 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 SMOQ99835 787 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 PNPLA8Q9NP80 782 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 KRT82Q9NSB4 513 aa14.75□□□□□ -0.05
VAMP1-208ENST00000544432 RIF1Q5UIP0 2472 aaKnown RBP14.75□□□□□ -0.05
VAMP1-208ENST00000544432 KIF26AQ9ULI4 1882 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 FAM200BP0CF97 657 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 CCDC130P13994 396 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 ANP32AP39687 249 aaKnown RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 SOX9P48436 509 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 TUBP50607 506 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 SLC5A3P53794 718 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 ORC1Q13415 861 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 CBWD6Q4V339 395 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 DCAF17Q5H9S7 520 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 CBWD3Q5JTY5 395 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 CBWD5Q5RIA9 395 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 TCERG1LQ5VWI1 586 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 ZC3H14Q6PJT7 736 aaKnown RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 TXNDC11Q6PKC3 985 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 SCAMP5Q8TAC9 235 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 SH3RF2Q8TEC5 729 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 NELFBQ8WX92 580 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 NELL1Q92832 810 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 RNF38Q9H0F5 515 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 FBXO44Q9H4M3 255 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 PRMT8Q9NR22 394 aaPredicted RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 DUS2Q9NX74 493 aaKnown RBP14.74□□□□□ -0.05
VAMP1-208ENST00000544432 KIAA1468Q9P260 1216 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
VAMP1-208ENST00000544432 DMDP11532 3685 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 WDR87Q6ZQQ6 2873 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 ZNF638Q14966 1978 aaKnown RBP14.73□□□□□ -0.05
VAMP1-208ENST00000544432 TRDMT1O14717 391 aaKnown RBP14.73□□□□□ -0.05
VAMP1-208ENST00000544432 BEST1O76090 585 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 GNA14O95837 355 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 CD58P19256 250 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 MAP3K7CLP57077 242 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 ZXDBP98169 803 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 MTAPQ13126 283 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 CLEC17AQ6ZS10 378 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 TTC8Q8TAM2 541 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 TATDN2Q93075 761 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 ATP2A3Q93084 1043 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 NKD2Q969F2 451 aaPredicted RBP14.73□□□□□ -0.05
VAMP1-208ENST00000544432 EXOC4Q96A65 974 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 FAM126AQ9BYI3 521 aaPredicted RBP14.73□□□□□ -0.05
VAMP1-208ENST00000544432 EBF3Q9H4W6 596 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 ECT2Q9H8V3 914 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 CISHQ9NSE2 258 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 FAM49BQ9NUQ9 324 aa14.73□□□□□ -0.05
VAMP1-208ENST00000544432 PTPRZ1P23471 2315 aaPredicted RBP14.73□□□□□ -0.05
VAMP1-208ENST00000544432 PRR23AA6NEV1 266 aa14.72□□□□□ -0.05
VAMP1-208ENST00000544432 OTOL1A6NHN0 477 aaPredicted RBP14.72□□□□□ -0.05
VAMP1-208ENST00000544432 HHLA1C9JL84 531 aa14.72□□□□□ -0.05
VAMP1-208ENST00000544432 LEFTY2O00292 366 aa14.72□□□□□ -0.05
VAMP1-208ENST00000544432 BIN1O00499 593 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms