RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CTAGE6Q86UF2 777 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 CTAGE4Q8IX94 777 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 COLGALT1Q8NBJ5 622 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 PTPRDP23468 1912 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 GRAP2O75791 330 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 GPD1P21695 349 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 RAB41Q5JT25 222 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 CC2D1AQ6P1N0 951 aaPredicted RBP31.97■■■□□ 2.71
CCM2-219ENST00000544363 ZNF572Q7Z3I7 529 aaPredicted RBP31.97■■■□□ 2.71
CCM2-219ENST00000544363 SIX6OS1Q8N1H7 587 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 RASGEF1CQ8N431 466 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 VN1R3Q9BXE9 311 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 EHD2Q9NZN4 543 aa31.97■■■□□ 2.71
CCM2-219ENST00000544363 CXXC1Q9P0U4 656 aaPredicted RBP31.97■■■□□ 2.71
CCM2-219ENST00000544363 PSTPIP1O43586 416 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 TADA3O75528 432 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 TKTL1P51854 596 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 ZNF143P52747 638 aaPredicted RBP31.96■■■□□ 2.71
CCM2-219ENST00000544363 RABGGTBP53611 331 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 TAS2R40P59535 323 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 HTRA4P83105 476 aaPredicted RBP31.96■■■□□ 2.71
CCM2-219ENST00000544363 ADCY1Q08828 1119 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 EFHC1Q5JVL4 640 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 ARCQ7LC44 396 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 RHOT1Q8IXI2 618 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 ACTRT1Q8TDG2 376 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 RXFP2Q8WXD0 754 aa31.96■■■□□ 2.71
CCM2-219ENST00000544363 FUBP3Q96I24 572 aaKnown RBP eCLIP31.96■■■□□ 2.71
CCM2-219ENST00000544363 CTIFO43310 598 aaKnown RBP31.95■■■□□ 2.71
CCM2-219ENST00000544363 FBXO21O94952 628 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 PDGFRAP16234 1089 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 FLT3P36888 993 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 RWDD2BP57060 319 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 ACAP1Q15027 740 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 TRNP1Q6NT89 227 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 HERVK_113Q902F9 699 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 TMEM169Q96HH4 297 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 RPGRIP1Q96KN7 1286 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 PNPLA8Q9NP80 782 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 SMARCAL1Q9NZC9 954 aa31.95■■■□□ 2.71
CCM2-219ENST00000544363 ZMYND8Q9ULU4 1186 aaPredicted RBP31.95■■■□□ 2.71
CCM2-219ENST00000544363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP31.95■■■□□ 2.71
CCM2-219ENST00000544363 UQCRHLA0A096LP55 91 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 EFCAB8A8MWE9 144 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 UQCRHP07919 91 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 SSR1P43307 286 aaKnown RBP31.94■■■□□ 2.7
CCM2-219ENST00000544363 NDUFV1P49821 464 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 MRPS5P82675 430 aaKnown RBP31.94■■■□□ 2.7
CCM2-219ENST00000544363 GPRIN1Q7Z2K8 1008 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 CNPY3Q9BT09 278 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 CHST7Q9NS84 486 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 ASNSD1Q9NWL6 643 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 SPG21Q9NZD8 308 aa31.94■■■□□ 2.7
CCM2-219ENST00000544363 DPYSL4O14531 572 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 CYP2F1P24903 491 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 CNGB3Q9NQW8 809 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 ABI2Q9NYB9 513 aaPredicted RBP31.93■■■□□ 2.7
CCM2-219ENST00000544363 PCDHB5Q9Y5E4 795 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 SOD2P04179 222 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 LRRC38Q5VT99 294 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 PRSS55Q6UWB4 352 aaPredicted RBP31.93■■■□□ 2.7
CCM2-219ENST00000544363 RSPO2Q6UXX9 243 aaPredicted RBP31.93■■■□□ 2.7
CCM2-219ENST00000544363 PIK3R5Q8WYR1 880 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 RNPC3Q96LT9 517 aaKnown RBP31.93■■■□□ 2.7
CCM2-219ENST00000544363 ZBED2Q9BTP6 218 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 ULBP1Q9BZM6 244 aa31.93■■■□□ 2.7
CCM2-219ENST00000544363 TTC7AQ9ULT0 858 aaPredicted RBP31.93■■■□□ 2.7
CCM2-219ENST00000544363 GRIK1P39086 918 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 GPR17Q13304 367 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 ZNF211Q13398 564 aaPredicted RBP31.92■■■□□ 2.7
CCM2-219ENST00000544363 ARFGAP1Q8N6T3 406 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 RIN2Q8WYP3 895 aaPredicted RBP31.92■■■□□ 2.7
CCM2-219ENST00000544363 AAASQ9NRG9 546 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 MTRRQ9UBK8 725 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 INSL6Q9Y581 213 aa31.92■■■□□ 2.7
CCM2-219ENST00000544363 PGRMC1O00264 195 aaKnown RBP31.91■■■□□ 2.7
CCM2-219ENST00000544363 LRCH4O75427 683 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 CPB1P15086 417 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 ARPP19P56211 112 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 ITIH3Q06033 890 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 SMARCB1Q12824 385 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 CCDC14Q49A88 953 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 VSTM1Q6UX27 236 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 NDRG1Q92597 394 aaKnown RBP31.91■■■□□ 2.7
CCM2-219ENST00000544363 SLC9A7Q96T83 725 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 BACE2Q9Y5Z0 518 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 SLC4A7Q9Y6M7 1214 aa31.91■■■□□ 2.7
CCM2-219ENST00000544363 HSF2BPO75031 334 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 RNF8O76064 485 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 GLI1P08151 1106 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 PYGMP11217 842 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 TCF4P15884 667 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 SDC4P31431 198 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 DAOAP59103 153 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 SEL1L2Q5TEA6 688 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 KIAA1841Q6NSI8 718 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 RSRC2Q7L4I2 434 aaKnown RBP31.9■■■□□ 2.7
CCM2-219ENST00000544363 FIBCD1Q8N539 461 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 SPATA4Q8NEY3 305 aa31.9■■■□□ 2.7
CCM2-219ENST00000544363 PHOSPHO2Q8TCD6 241 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms