RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 FAM20CQ8IXL6 584 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 ACTRT1Q8TDG2 376 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 PYROXD1Q8WU10 500 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 SLC20A1Q8WUM9 679 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 SYN2Q92777 582 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 NEURL2Q9BR09 285 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 ERP44Q9BS26 406 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 KLHL25Q9H0H3 589 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 DDX56Q9NY93 547 aaKnown RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 A8MU76 341 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 CSPG5O95196 566 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 ICAM1P05362 532 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 ADRM1Q16186 407 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 SYCP2LQ5T4T6 812 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 ARHGEF16Q5VV41 709 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 FYB2Q5VWT5 728 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 METTL25Q8N6Q8 603 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 LNX1Q8TBB1 728 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 RPTORQ8N122 1335 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 COL4A5P29400 1685 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 RGPD3A6NKT7 1758 aaPredicted RBP11.76□□□□□ -0.53
CDH4-201ENST00000543233 RGPD4Q7Z3J3 1758 aa11.76□□□□□ -0.53
CDH4-201ENST00000543233 PFASO15067 1338 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 IGSF9BQ9UPX0 1349 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 RBAK-RBAKDNI3L0D1 243 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 ZWINTO95229 277 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 TFAP2AP05549 437 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 TNFAIP3P21580 790 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CRABP2P29373 138 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 GSSP48637 474 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 BAATQ14032 418 aaPredicted RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 PCSK7Q16549 785 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 OGFOD2Q6N063 350 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 DPY19L2P1Q6NXN4 242 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CLNKQ7Z7G1 428 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 GCNAQ96QF7 691 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 TTC7AQ9ULT0 858 aaPredicted RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 AK5Q9Y6K8 562 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CHRNB1P11230 501 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 YWHABP31946 246 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 SLC5A3P53794 718 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PPP3CAQ08209 521 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 OVGP1Q12889 678 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 MAPK7Q13164 816 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 SF3B4Q15427 424 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDH4-201ENST00000543233 TRIP10Q15642 601 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 MDH1BQ5I0G3 518 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ITPRIPL1Q6GPH6 555 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PRR23CQ6ZRP0 262 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 STXBP4Q6ZWJ1 553 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ZNF280CQ8ND82 737 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PYDC1Q8WXC3 89 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CLPTM1LQ96KA5 538 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ANLNQ9NQW6 1124 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 NR2E1Q9Y466 385 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 DLATP10515 647 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 RFC1P35251 1148 aaPredicted RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 SOX5P35711 763 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PTGER2P43116 358 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 QARSP47897 775 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 RARRES1P49788 294 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 HMGCS2P54868 508 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CSE1LP55060 971 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 ADAM17P78536 824 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 BFSP1Q12934 665 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 BMT2Q1RMZ1 405 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 RNF19BQ6ZMZ0 732 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 RNF207Q6ZRF8 634 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 HAUS6Q7Z4H7 955 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 GRAMD2AQ8IUY3 354 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ZC3H3Q8IXZ2 948 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 CENPSQ8N2Z9 138 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 ARHGEF26Q96DR7 871 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 XAB2Q9HCS7 855 aaKnown RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 TOPORSQ9NS56 1045 aaPredicted RBP11.75□□□□□ -0.53
CDH4-201ENST00000543233 UVRAGQ9P2Y5 699 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 SCINQ9Y6U3 715 aa11.75□□□□□ -0.53
CDH4-201ENST00000543233 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
CDH4-201ENST00000543233 SLC16A3O15427 465 aaKnown RBP11.74□□□□□ -0.53
CDH4-201ENST00000543233 TMCC2O75069 709 aa11.74□□□□□ -0.53
CDH4-201ENST00000543233 PMLP29590 882 aa11.74□□□□□ -0.53
CDH4-201ENST00000543233 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
CDH4-201ENST00000543233 LMNB2Q03252 620 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms