RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 USP33Q8TEY7 942 aa25.56■■□□□ 1.68
LEMD3-203ENST00000541171 TCEAL3Q969E4 200 aa25.56■■□□□ 1.68
LEMD3-203ENST00000541171 TPSD1Q9BZJ3 242 aa25.56■■□□□ 1.68
LEMD3-203ENST00000541171 ZNF518BQ9C0D4 1074 aa25.56■■□□□ 1.68
LEMD3-203ENST00000541171 EML5Q05BV3 1969 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 K7EQS6 105 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 CLDN5O00501 218 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 POLR2DO15514 142 aaKnown RBP25.55■■□□□ 1.68
LEMD3-203ENST00000541171 PHACTR2O75167 634 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 KRT37O76014 449 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 YEATS4O95619 227 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 PPP3CCP48454 512 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 NOP14P78316 857 aaKnown RBP25.55■■□□□ 1.68
LEMD3-203ENST00000541171 SLC7A9P82251 487 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 CNNM4Q6P4Q7 775 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 UNC13DQ70J99 1090 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 TTC30AQ86WT1 665 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 CCDC33Q8N5R6 958 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 CHAMP1Q96JM3 812 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 SLC39A2Q9NP94 309 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 TMEM30AQ9NV96 361 aa25.55■■□□□ 1.68
LEMD3-203ENST00000541171 CNOT1A5YKK6 2376 aaKnown RBP25.54■■□□□ 1.68
LEMD3-203ENST00000541171 CYP17A1P05093 508 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 FAM163BP0C2L3 166 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 GAB4Q2WGN9 574 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 ADGRG2Q8IZP9 1017 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 SLITRK1Q96PX8 696 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 B3GNT5Q9BYG0 378 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 ELOVL4Q9GZR5 314 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 CFAP97Q9P2B7 532 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 UBE4BO95155 1302 aa25.54■■□□□ 1.68
LEMD3-203ENST00000541171 MBL2P11226 248 aaPredicted RBP25.53■■□□□ 1.68
LEMD3-203ENST00000541171 SLC6A11P48066 632 aa25.53■■□□□ 1.68
LEMD3-203ENST00000541171 SNRPFP62306 86 aaKnown RBP25.53■■□□□ 1.68
LEMD3-203ENST00000541171 DHCR24Q15392 516 aa25.53■■□□□ 1.68
LEMD3-203ENST00000541171 USP39Q53GS9 565 aaKnown RBP25.53■■□□□ 1.68
LEMD3-203ENST00000541171 N4BP2L1Q5TBK1 243 aaPredicted RBP25.53■■□□□ 1.68
LEMD3-203ENST00000541171 ANO7Q6IWH7 933 aa25.53■■□□□ 1.68
LEMD3-203ENST00000541171 B3GALNT2Q8NCR0 500 aa25.53■■□□□ 1.68
LEMD3-203ENST00000541171 GZF1Q9H116 711 aaPredicted RBP25.53■■□□□ 1.68
LEMD3-203ENST00000541171 SLC9A3R1O14745 358 aaPredicted RBP25.52■■□□□ 1.68
LEMD3-203ENST00000541171 TM4SF5O14894 197 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 EXOC3O60645 756 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 CAVIN2O95810 425 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 OLFM2O95897 454 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 OAS1P00973 400 aaKnown RBP25.52■■□□□ 1.68
LEMD3-203ENST00000541171 AFMP43652 599 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 CASP4P49662 377 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 EHHADHQ08426 723 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 BIRC3Q13489 604 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 RNF43Q68DV7 783 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 NUP93Q8N1F7 819 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 SYAP1Q96A49 352 aaPredicted RBP25.52■■□□□ 1.68
LEMD3-203ENST00000541171 PTPRDP23468 1912 aa25.52■■□□□ 1.68
LEMD3-203ENST00000541171 HELZP42694 1942 aaKnown RBP25.51■■□□□ 1.67
LEMD3-203ENST00000541171 YWHAQP27348 245 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 ATICP31939 592 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 CDH8P55286 799 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 SFTPA1Q8IWL2 248 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 FBXO32Q969P5 355 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 ELMO3Q96BJ8 720 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 MED10Q9BTT4 135 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 XYLT2Q9H1B5 865 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 SMYD3Q9H7B4 428 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 MAGEF1Q9HAY2 307 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 MMP17Q9ULZ9 603 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 GTF3C3Q9Y5Q9 886 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 MYO16Q9Y6X6 1858 aa25.51■■□□□ 1.67
LEMD3-203ENST00000541171 BCLAF3A2AJT9 711 aaKnown RBP25.5■■□□□ 1.67
LEMD3-203ENST00000541171 CUL4BQ13620 913 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 RHBDF2Q6PJF5 856 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 SCARA5Q6ZMJ2 495 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 PLEKHO2Q8TD55 490 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 KCNK16Q96T55 309 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 PNKPQ96T60 521 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 EDEM2Q9BV94 578 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 FAM13BQ9NYF5 915 aa25.5■■□□□ 1.67
LEMD3-203ENST00000541171 CHORDC1Q9UHD1 332 aaPredicted RBP25.5■■□□□ 1.67
LEMD3-203ENST00000541171 STAU1O95793 577 aaKnown RBP25.49■■□□□ 1.67
LEMD3-203ENST00000541171 TIE1P35590 1138 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 ME1P48163 572 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 MESP2Q0VG99 397 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 CRY1Q16526 586 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 ST3GAL2Q16842 350 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 KNOP1Q1ED39 458 aaKnown RBP25.49■■□□□ 1.67
LEMD3-203ENST00000541171 BMT2Q1RMZ1 405 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 C12orf40Q86WS4 652 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 DDX42Q86XP3 938 aaKnown RBP eCLIP25.49■■□□□ 1.67
LEMD3-203ENST00000541171 C12orf56Q8IXR9 622 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 GRAMD1CQ8IYS0 662 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 ALLCQ8N6M5 410 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 BACH2Q9BYV9 841 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 CGNQ9P2M7 1197 aaKnown RBP25.49■■□□□ 1.67
LEMD3-203ENST00000541171 CIZ1Q9ULV3 898 aaPredicted RBP25.49■■□□□ 1.67
LEMD3-203ENST00000541171 PCDHA7Q9UN72 937 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 CHD8Q9HCK8 2581 aa25.49■■□□□ 1.67
LEMD3-203ENST00000541171 ATP8B3O60423 1300 aa25.48■■□□□ 1.67
LEMD3-203ENST00000541171 PVALEFA0A1B0GWK0 134 aa25.48■■□□□ 1.67
LEMD3-203ENST00000541171 RTN3O95197 1032 aaPredicted RBP25.48■■□□□ 1.67
LEMD3-203ENST00000541171 KLF8O95600 359 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms