RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 EFHD2Q96C19 240 aaPredicted RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CTRCQ99895 268 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TSSK1BQ9BXA7 367 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 KIAA1586Q9HCI6 787 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 SEPT11Q9NVA2 429 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DDX56Q9NY93 547 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 NCKIPSDQ9NZQ3 722 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 KLHL3Q9UH77 587 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ERVK-11Q9UQG0 969 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 IGSF9BQ9UPX0 1349 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 A0A1W2PPM1 405 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CYTH3O43739 400 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A9O60656 530 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 SIN3BO75182 1162 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DDHD2O94830 711 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A6P19224 532 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 POLR2EP19388 210 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A1P22309 533 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A4P22310 534 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CTNNA2P26232 953 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A3P35503 534 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A5P35504 534 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ALDH1A3P47895 512 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 GPC3P51654 580 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 IRX4P78413 519 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 MRPS9P82933 396 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ARHGAP4P98171 946 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TRIM16LQ309B1 348 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 APOBEC3HQ6NTF7 200 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 USP43Q70EL4 1123 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 LRRC49Q8IUZ0 686 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ATP2A3Q93084 1043 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DYNLL2Q96FJ2 89 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CCDC138Q96M89 665 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A7Q9HAW7 530 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A10Q9HAW8 530 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UGT1A8Q9HAW9 530 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 HACD3Q9P035 362 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ANAPC5Q9UJX4 755 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 KRBA1A5PL33 1030 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 PIK3CDO00329 1044 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TBCAO75347 108 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 SORBS2O94875 1100 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 PTPN2P17706 415 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DDX5P17844 614 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CSE1LP55060 971 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TROAPQ12815 778 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 ITGADQ13349 1161 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 C6orf52Q5T4I8 152 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 CLVS1Q8IUQ0 354 aaPredicted RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 GUF1Q8N442 669 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 UBL4BQ8N7F7 174 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 TSPAN14Q8NG11 270 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 C1orf54Q8WWF1 131 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 PSPC1Q8WXF1 523 aaKnown RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 RFFLQ8WZ73 363 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 GMLQ99445 158 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 HAUS8Q9BT25 410 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 NUF2Q9BZD4 464 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 MANSC1Q9H8J5 431 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 KCNK13Q9HB14 408 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 DCP1AQ9NPI6 582 aaPredicted RBP10.13□□□□□ -0.79
CLDN2-202ENST00000540876 WHRNQ9P202 907 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 SATB2Q9UPW6 733 aa10.13□□□□□ -0.79
CLDN2-202ENST00000540876 FAM237BA0A1B0GVD1 139 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 DCAF8L1A6NGE4 600 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 TMX2-CTNND1H3BSU7 103 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 TP73O15350 636 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 ESRRBO95718 433 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 UCHL3P15374 230 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 FKBP3Q00688 224 aaKnown RBP10.12□□□□□ -0.79
CLDN2-202ENST00000540876 TFAP4Q01664 338 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 HP1BP3Q5SSJ5 553 aaPredicted RBP10.12□□□□□ -0.79
CLDN2-202ENST00000540876 SIGIRRQ6IA17 410 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 DCLRE1AQ6PJP8 1040 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 PRPF39Q86UA1 669 aaKnown RBP10.12□□□□□ -0.79
CLDN2-202ENST00000540876 Q8N9G6 341 aaPredicted RBP10.12□□□□□ -0.79
CLDN2-202ENST00000540876 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 TRPC4APQ8TEL6 797 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 CAPSLQ8WWF8 208 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 RNF38Q9H0F5 515 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 IGSF9Q9P2J2 1179 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 NID2Q14112 1375 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 FER1L6Q2WGJ9 1857 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 POTECB2RU33 542 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 PSMD11O00231 422 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 CCDC130P13994 396 aa10.12□□□□□ -0.79
CLDN2-202ENST00000540876 NELFEP18615 380 aaKnown RBP10.12□□□□□ -0.79
CLDN2-202ENST00000540876 ITIH2P19823 946 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms