RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ABCB4P21439 1286 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GTF2F1P35269 517 aaKnown RBP eCLIP19.95■□□□□ 0.781e-6■■■■□ 22.9
TNFRSF1A-213ENST00000540022 RPL34P49207 117 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 C1QBPQ07021 282 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SDHAF4Q5VUM1 108 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PPP1R2P3Q6NXS1 205 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 H2AFVQ71UI9 128 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GPRIN1Q7Z2K8 1008 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TMEM110Q86TL2 294 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 KCTD13Q8WZ19 329 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 HSFY1Q96LI6 401 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 C8orf48Q96LL4 319 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CYP4F11Q9HBI6 524 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ADAM22Q9P0K1 906 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PPP2R2CQ9Y2T4 447 aa19.95■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ANKRD62A6NC57 917 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TRIM66O15016 1216 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SPATA31D3P0C874 917 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 VAV2P52735 878 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TFF2Q03403 129 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PTPROQ16827 1216 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TJAP1Q5JTD0 557 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SPATA31D4Q6ZUB0 917 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 THAP2Q9H0W7 228 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PNPLA8Q9NP80 782 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 HSFX1Q9UBD0 423 aa19.94■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CLASP2O75122 1294 aaKnown RBP19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GLUD1P00367 558 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GABRB2P47870 512 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TUFMP49411 452 aaKnown RBP19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CLCN4P51793 760 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TCEAL5Q5H9L2 206 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CYP4A22Q5TCH4 519 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LLGL2Q6P1M3 1020 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PHLDB2Q86SQ0 1253 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 KIAA1328Q86T90 577 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TCEAL8Q8IYN2 117 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 STKLD1Q8NE28 680 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 IPO4Q8TEX9 1081 aaKnown RBP19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 C18orf8Q96DM3 657 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 VCPIP1Q96JH7 1222 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LACRTQ9GZZ8 138 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LUC7LQ9NQ29 371 aaKnown RBP19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CYLDQ9NQC7 956 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 FBXW11Q9UKB1 542 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 INTUQ9ULD6 942 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MAFFQ9ULX9 164 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ZKSCAN5Q9Y2L8 839 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 YIPF1Q9Y548 306 aa19.93■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TNFRSF10BO14763 440 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ATMINO43313 823 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CALB1P05937 261 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TMEM253P0C7T8 217 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LCP1P13796 627 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ATF6P18850 670 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 RRM1P23921 792 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ELF1P32519 619 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ACADSBP45954 432 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 RPL10AP62906 217 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MRPS5P82675 430 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 RBM10P98175 930 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ADIGQ0VDE8 80 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 RAB41Q5JT25 222 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MSANTD4Q8NCY6 345 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GPR152Q8TDT2 470 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ZNF653Q96CK0 615 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ARHGEF26Q96DR7 871 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SYNCQ9H7C4 482 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LRRC4Q9HBW1 653 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CHORDC1Q9UHD1 332 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PRRG1O14668 218 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PAPSS1O43252 624 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TKTL1P51854 596 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SLC5A3P53794 718 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 XYLT1Q86Y38 959 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SCUBE3Q8IX30 993 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 KREMEN2Q8NCW0 462 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 KIAA1524Q8TCG1 905 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CTNNBL1Q8WYA6 563 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MIS12Q9H081 205 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CNOT8Q9UFF9 292 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 COG5Q9UP83 839 aa19.92■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PJA2O43164 708 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ABL1P00519 1130 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 NRIP1P48552 1158 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GPC5P78333 572 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SCAMP5Q8TAC9 235 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GIPC2Q8TF65 315 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SLC22A17Q8WUG5 538 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TRIM11Q96F44 468 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 PIWIL1Q96J94 861 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SPATA17Q96L03 361 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 NSUN3Q9H649 340 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TRMT1Q9NXH9 659 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MYO1AQ9UBC5 1043 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TRIM10Q9UDY6 481 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms