RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 SHPRHQ149N8 1683 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ROBO1Q9Y6N7 1651 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 POLRMTO00411 1230 aaKnown RBP2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 NTN3O00634 580 aaPredicted RBP2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 PPM1DO15297 605 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 GRID2O43424 1007 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 SLC28A2O43868 658 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 USP1O94782 785 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 CD6P30203 668 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 LIPAP38571 399 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 CTXN1P60606 82 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 POU6F2P78424 691 aaPredicted RBP2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 GHRHRQ02643 423 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF91Q05481 1191 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 MGAT2Q10469 447 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 MALLQ13021 153 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 TOR2AQ5JU69 321 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 VPS53Q5VIR6 699 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 DAB2IPQ5VWQ8 1189 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 NPNTQ6UXI9 565 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 COLCA1Q6ZS62 124 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 PELI3Q8N2H9 469 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 LRRC71Q8N4P6 559 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 DPF2Q92785 391 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 FAM136AQ96C01 138 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 DAZAP1Q96EP5 407 aaKnown RBP2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 TESK2Q96S53 571 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 OSBPL9Q96SU4 736 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 KANSL2Q9H9L4 492 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 DUSP22Q9NRW4 184 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 JKAMPQ9P055 326 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 BCCIPQ9P287 314 aaKnown RBP eCLIP2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 USP35Q9P2H5 1018 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 ADAMTS5Q9UNA0 930 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 PCDHGA2Q9Y5H1 932 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 C1orf167Q5SNV9 1468 aa2.43□□□□□ -2.02
CBX3P4-201ENST00000538909 SPATA31A3Q5VYP0 1347 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 ANKARQ7Z5J8 1434 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 COL18A1P39060 1754 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PIK3C2AO00443 1686 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 LMO7Q8WWI1 1683 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 CAMTA1Q9Y6Y1 1673 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 POLR3AO14802 1390 aaPredicted RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TMEM94Q12767 1356 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 FAM171A2A8MVW0 826 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 E9PLN8 166 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 EXOC3O60645 756 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PDE8BO95263 885 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 CENPBP07199 599 aaPredicted RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PLA2G2AP14555 144 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PDE1AP54750 535 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 IRX6P78412 446 aaPredicted RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PABPC1LQ4VXU2 614 aaKnown RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 NAALADL2Q58DX5 795 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TREML2Q5T2D2 321 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TEDDM1Q5T9Z0 273 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 SERPINA13PQ6UXR4 307 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF365Q70YC5 407 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 MAVSQ7Z434 540 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 WDR53Q7Z5U6 358 aaPredicted RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF329Q86UD4 541 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 CMIPQ8IY22 773 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 PMFBP1Q8TBY8 1022 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 POC1BQ8TC44 478 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 MKL1Q969V6 931 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TMX3Q96JJ7 454 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 VKORC1Q9BQB6 163 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 EFHD1Q9BUP0 239 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 MLXIPQ9HAP2 919 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 HEY2Q9UBP5 337 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 SLIT3O75094 1523 aa2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 CPSF1Q10570 1443 aaKnown RBP2.42□□□□□ -2.02
CBX3P4-201ENST00000538909 TONSLQ96HA7 1378 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 USP47Q96K76 1375 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 DISP3Q9P2K9 1392 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 POC1B-GALNT4F8VUJ3 575 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 FZD9O00144 591 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 CAMTA2O94983 1202 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 NPSP0C0P6 89 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 ITGALP20701 1170 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 ME1P48163 572 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 ZXDBP98169 803 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 GTF2H3Q13889 308 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 ASIC2Q16515 512 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 C9orf50Q5SZB4 431 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 TAF2Q6P1X5 1199 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 PIP4P1Q86T03 277 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 RSPH3Q86UC2 560 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 RHOT1Q8IXI2 618 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 GALNT4Q8N4A0 578 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 CLRN3Q8NCR9 226 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 PSD4Q8NDX1 1056 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 NAP1L5Q96NT1 182 aaPredicted RBP2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 PSMD1Q99460 953 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 TMEM184CQ9NVA4 438 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 CD2APQ9Y5K6 639 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 EID1Q9Y6B2 187 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 NRAPQ86VF7 1730 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms