RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF461Q8TAF7 563 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 SPPL2BQ8TCT7 592 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 RFFLQ8WZ73 363 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 NOX5Q96PH1 765 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 NUP85Q9BW27 656 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 GOLPH3Q9H4A6 298 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 ABCB6Q9NP58 842 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 STK39Q9UEW8 545 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 AFF4Q9UHB7 1163 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 ATF6P18850 670 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 MAGEA11P43364 429 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 TKTL1P51854 596 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 IFRD2Q12894 506 aaPredicted RBP16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 MTMR3Q13615 1198 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 LIN9Q5TKA1 542 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 PLEKHA7Q6IQ23 1121 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 OLFML1Q6UWY5 402 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 CPNE8Q86YQ8 564 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 JOSD2Q8TAC2 188 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 KCTD13Q8WZ19 329 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 VCPIP1Q96JH7 1222 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 HSFY1Q96LI6 401 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 ULBP1Q9BZM6 244 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 CYP4F11Q9HBI6 524 aa16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 METTL5Q9NRN9 209 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
SFSWAP-206ENST00000537582 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TGM5O43548 720 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 KRT86O43790 486 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 GRAP2O75791 330 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 MYBL1P10243 752 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 ATF2P15336 505 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 NOP2P46087 812 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 SLC5A3P53794 718 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 USP46P62068 366 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 RPL7AP62424 266 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 SMAD3P84022 425 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 PTPROQ16827 1216 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 RAB41Q5JT25 222 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 PPP1R15BQ5SWA1 713 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TRNP1Q6NT89 227 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 DNAJC24Q6P3W2 148 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 ADGRD2Q7Z7M1 963 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 GPR65Q8IYL9 337 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 EMC1Q8N766 993 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 KHSRPQ92945 711 aaKnown RBP eCLIP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TRIM11Q96F44 468 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 C16orf45Q96MC5 204 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TSGA10Q9BZW7 698 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 LRRC4Q9HBW1 653 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 IRAK3Q9Y616 596 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 MYH10P35580 1976 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 BTNL10A8MVZ5 291 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 PER2O15055 1255 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 FANCGO15287 622 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 USP17L7P0C7H9 530 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 KLRC2P26717 231 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 PGFP49763 221 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 NAP1L1P55209 391 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 SMARCB1Q12824 385 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 FAM102AQ5T9C2 384 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TPGS2Q68CL5 300 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 HFE2Q6ZVN8 426 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 BHLHA9Q7RTU4 235 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 MSANTD4Q8NCY6 345 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 ZNF564Q8TBZ8 553 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 C2orf15Q8WU43 125 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 C8orf48Q96LL4 319 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 SSX2IPQ9Y2D8 614 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 YIPF1Q9Y548 306 aa16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 COL4A4P53420 1690 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-206ENST00000537582 TRANK1O15050 2925 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 PATJQ8NI35 1801 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 A0A0A6YYK5 440 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 GRID2IPA4D2P6 1211 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 TMEM110-MUSTN1A8MSY1 372 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 CCP110O43303 1012 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 LPXNO60711 386 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 ACADSBP45954 432 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 OGDHQ02218 1023 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 CREMQ03060 361 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 ZNF268Q14587 947 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 LILRA6Q6PI73 481 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 RBM23Q86U06 439 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 SIX6OS1Q8N1H7 587 aa16.46■□□□□ 0.23
SFSWAP-206ENST00000537582 TPCN2Q8NHX9 752 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms