RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ABL1P00519 1130 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 HSP90AA1P07900 732 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ZNF806P0C7X5 589 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CUL4BQ13620 913 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 RESP18Q5W5W9 173 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 KIAA1958Q8N8K9 716 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 C12orf50Q8NA57 414 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 B3GALNT2Q8NCR0 500 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ZC3H10Q96K80 434 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SLITRK1Q96PX8 696 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ZNF518BQ9C0D4 1074 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 RNF38Q9H0F5 515 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 GZF1Q9H116 711 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 XYLT2Q9H1B5 865 aa20.95■□□□□ 0.94
TNFRSF1B-204ENST00000536782 MYOFQ9NZM1 2061 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 APBB3O95704 486 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 OLFM2O95897 454 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CACNA2D1P54289 1103 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 TAF10Q12962 218 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SF3A2Q15428 464 aaKnown RBP20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CCDC6Q16204 474 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PPM1JQ5JR12 505 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ATL3Q6DD88 541 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ABCA7Q8IZY2 2146 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 GOLGA5Q8TBA6 731 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 B3GNT5Q9BYG0 378 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 EBF1Q9UH73 591 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PCDHGA5Q9Y5G8 931 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CPQQ9Y646 472 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 NUP205Q92621 2012 aa20.94■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SLC9A3R1O14745 358 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CLSTN1O94985 981 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 OAS1P00973 400 aaKnown RBP20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 OPRD1P41143 372 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CASP4P49662 377 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 AP3M2P53677 418 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 IFRD2Q12894 506 aaPredicted RBP20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 BIRC3Q13489 604 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 IL31Q6EBC2 164 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 FILIP1Q7Z7B0 1213 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CEP57L1Q8IYX8 460 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 NUP93Q8N1F7 819 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DDX1Q92499 740 aaKnown RBP20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 TMEM30AQ9NV96 361 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SMPD4Q9NXE4 827 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CFAP45Q9UL16 551 aa20.93■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CLDN5O00501 218 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 RTN3O95197 1032 aaPredicted RBP20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ADRB1P08588 477 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 YWHAQP27348 245 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 LIMK1P53667 647 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ELF2Q15723 593 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ZNF699Q32M78 642 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PLK5Q496M5 336 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ZNF667Q5HYK9 610 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 GRAMD1CQ8IYS0 662 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ADGRG2Q8IZP9 1017 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 TSTD1Q8NFU3 115 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 USP33Q8TEY7 942 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 VRTNQ9H8Y1 702 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CEP295Q9C0D2 2601 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 ATP8B3O60423 1300 aa20.92■□□□□ 0.94
TNFRSF1B-204ENST00000536782 K7EQS6 105 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 RHOBTB1O94844 696 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CYP17A1P05093 508 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 MBL2P11226 248 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 MPLP40238 635 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DGKEP52429 567 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SEC13P55735 322 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 GAB4Q2WGN9 574 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 C2orf27AQ580R0 203 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PLA2G2CQ5R387 149 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DDX42Q86XP3 938 aaKnown RBP eCLIP20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PDZD8Q8NEN9 1154 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PLEKHO2Q8TD55 490 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 PARD3BQ8TEW8 1205 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 OVCA2Q8WZ82 227 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 TNIP3Q96KP6 325 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DUSP15Q9H1R2 295 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SMYD3Q9H7B4 428 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CFAP97Q9P2B7 532 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
TNFRSF1B-204ENST00000536782 MYO18AQ92614 2054 aaKnown RBP20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 LRRIQ3A6PVS8 624 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DCLK1O15075 740 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SLFN14P0C7P3 912 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CDH8P55286 799 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 CLDN10P78369 228 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 NCOA4Q13772 614 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 DHCR24Q15392 516 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 FBXO32Q969P5 355 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 KCNK16Q96T55 309 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 MED10Q9BTT4 135 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 VPS45Q9NRW7 570 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 EXOC1Q9NV70 894 aa20.9■□□□□ 0.94
TNFRSF1B-204ENST00000536782 SCAMP3O14828 347 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KLRC4O43908 158 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 C4BPAP04003 597 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 STK4Q13043 487 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms