RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PAGE5Q96GU1 130 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 CEP295NLQ96MC4 621 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 HHIPQ96QV1 700 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 SMG9Q9H0W8 520 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 XYLT2Q9H1B5 865 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 KCTD10Q9H3F6 313 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 VRTNQ9H8Y1 702 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 HPS4Q9NQG7 708 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 UXTQ9UBK9 157 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 CCL26Q9Y258 94 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 MSRB2Q9Y3D2 182 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 PCNX2A6NKB5 2137 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 ABCA7Q8IZY2 2146 aa10.76□□□□□ -0.69
CLSTN3-203ENST00000534830 LAMA5O15230 3695 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 OTOL1A6NHN0 477 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 ATG13O75143 517 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 DLATP10515 647 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 TNNI1P19237 187 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 CYP2J2P51589 502 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 TNK2Q07912 1038 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 PSMD2Q13200 908 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 TAF12Q16514 161 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 VSTM1Q6UX27 236 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 HS2ST1Q7LGA3 356 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 SPATA2LQ8IUW3 424 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 SLC9A9Q8IVB4 645 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 SPRYD3Q8NCJ5 442 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 PARD3BQ8TEW8 1205 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 GCNAQ96QF7 691 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 FNBP1Q96RU3 617 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 SYT15Q9BQS2 421 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 MRPL45Q9BRJ2 306 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 KIF9Q9HAQ2 790 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 GKN1Q9NS71 199 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 TDP1Q9NUW8 608 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 POLR3BQ9NW08 1133 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 GCNT4Q9P109 453 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 MAGEC2Q9UBF1 373 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 USP25Q9UHP3 1055 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 GPSM3Q9Y4H4 160 aa10.75□□□□□ -0.69
CLSTN3-203ENST00000534830 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 CACNA1EQ15878 2313 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MYH10P35580 1976 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 THADAQ6YHU6 1953 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 A0A1B0GVL5 298 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 CDX4O14627 284 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 C4BPAP04003 597 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MYL1P05976 194 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 PDGFRBP09619 1106 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 TCF3P15923 654 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 PFKFB1P16118 471 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 ATICP31939 592 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 GNL1P36915 607 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 AVPR1AP37288 418 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 PSMC1P62191 440 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 GRSF1Q12849 480 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 RUNX3Q13761 415 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MAPRE1Q15691 268 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 COL28A1Q2UY09 1125 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 ITPRIPL2Q3MIP1 535 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 KMT5BQ4FZB7 885 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 C4orf50Q6ZRC1 276 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 PROSER1Q86XN7 944 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 CAMKK1Q8N5S9 505 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MRPS31Q92665 395 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MYLPFQ96A32 169 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 PCED1BQ96HM7 432 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 SLC22A12Q96S37 553 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 TTLL2Q9BWV7 592 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 SLC32A1Q9H598 525 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 THG1LQ9NWX6 298 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MAGED2Q9UNF1 606 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 FREM2Q5SZK8 3169 aa10.74□□□□□ -0.69
CLSTN3-203ENST00000534830 MYOFQ9NZM1 2061 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 ASH1LQ9NR48 2969 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 SPAARA0A1B0GVQ0 90 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 LRRIQ3A6PVS8 624 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 PATE3B3GLJ2 98 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 TRDMT1O14717 391 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 EXOC3O60645 756 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 VNN1O95497 513 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 PFKLP17858 780 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 BDNFP23560 247 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 CASP4P49662 377 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 AP3M2P53677 418 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 MCCD1P59942 119 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 MYL6P60660 151 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 IRX4P78413 519 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 SIM1P81133 766 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 ZXDBP98169 803 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 FAM160A1Q05DH4 1040 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 USP4Q13107 963 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 ZNF77Q15935 545 aa10.73□□□□□ -0.69
CLSTN3-203ENST00000534830 WDR72Q3MJ13 1102 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms