RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 SCAMP5Q8TAC9 235 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 GPT2Q8TD30 523 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 FBXO32Q969P5 355 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 TMEM176AQ96HP8 235 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
CPSF1-210ENST00000532935 MTF2Q9Y483 593 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-210ENST00000532935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.28■□□□□ 0.2
CPSF1-210ENST00000532935 SHISA7A6NL88 538 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 GOLGA6L22H0YM25 854 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 ABL1P00519 1130 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 GLULP15104 373 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PFKLP17858 780 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 HDCP19113 662 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 TBXAS1P24557 533 aaPredicted RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PDE6CP51160 858 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 RAD23BP54727 409 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PTPN5P54829 565 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 DPCR1Q3MIW9 517 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PPP1R26Q5T8A7 1209 aaPredicted RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 ZNF852Q6ZMS4 543 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 CLEC20AQ6ZU45 233 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 CCDC105Q8IYK2 499 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 DTWD2Q8NBA8 298 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PDZD8Q8NEN9 1154 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 LMO3Q8TAP4 145 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 RIN3Q8TB24 985 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 OVCA2Q8WZ82 227 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 CNOT6LQ96LI5 555 aaKnown RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.2
CPSF1-210ENST00000532935 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 OSBPL6Q9BZF3 934 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 COMMD8Q9NX08 183 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 IL37Q9NZH6 218 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 PIAS3Q9Y6X2 628 aa16.27■□□□□ 0.2
CPSF1-210ENST00000532935 MYO15AQ9UKN7 3530 aa16.27■□□□□ 0.19
CPSF1-210ENST00000532935 CACNA1IQ9P0X4 2223 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 FAM170BA6NMN3 283 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 MAN2B1O00754 1011 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
CPSF1-210ENST00000532935 PLA2G5P39877 138 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 KPNA1P52294 538 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-210ENST00000532935 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-210ENST00000532935 USP4Q13107 963 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 NELL2Q99435 816 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 GTSE1Q9NYZ3 720 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 ARHGAP26Q9UNA1 814 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 MRPS17Q9Y2R5 130 aaKnown RBP16.26■□□□□ 0.19
CPSF1-210ENST00000532935 DMDP11532 3685 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 VPS13AQ96RL7 3174 aa16.26■□□□□ 0.19
CPSF1-210ENST00000532935 FAM92AA1XBS5 289 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 HHLA1C9JL84 531 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
CPSF1-210ENST00000532935 NHLH1Q02575 133 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 TNK2Q07912 1038 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 MTF1Q14872 753 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 ZNF77Q15935 545 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 CC2D1AQ6P1N0 951 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-210ENST00000532935 IRF2BP1Q8IU81 584 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 PPM1KQ8N3J5 372 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 UBR7Q8N806 425 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 EHBP1Q8NDI1 1231 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 TTC8Q8TAM2 541 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 SH3RF2Q8TEC5 729 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 FAM3CQ92520 227 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 MSANTD3Q96H12 275 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 FAM83CQ9BQN1 747 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 DUSP16Q9BY84 665 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 RNF38Q9H0F5 515 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 FBXO44Q9H4M3 255 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 C8orf33Q9H7E9 229 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-210ENST00000532935 PNPLA8Q9NP80 782 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 GMIPQ9P107 970 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-210ENST00000532935 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
CPSF1-210ENST00000532935 OLFM2O95897 454 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 TCF3P15923 654 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-210ENST00000532935 SOX9P48436 509 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 SLC7A9P82251 487 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-210ENST00000532935 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 ARHGAP17Q68EM7 881 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 GPRIN1Q7Z2K8 1008 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
CPSF1-210ENST00000532935 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
CPSF1-210ENST00000532935 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
CPSF1-210ENST00000532935 SPECC1L-ADORA2AF8WAN1 911 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms