RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PON2Q15165 354 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 TXNDC11Q6PKC3 985 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 MAMSTRQ6ZN01 415 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 C12orf29Q8N999 325 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 FBXL13Q8NEE6 735 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 SLC2A14Q8TDB8 520 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 SH3RF2Q8TEC5 729 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 OSCP1Q8WVF1 389 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 FBXO32Q969P5 355 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 DHTKD1Q96HY7 919 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 HPS4Q9NQG7 708 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 COMMD8Q9NX08 183 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 DUS2Q9NX74 493 aaKnown RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 CHORDC1Q9UHD1 332 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 ARHGAP26Q9UNA1 814 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 KIF26AQ9ULI4 1882 aaPredicted RBP18.28■□□□□ 0.52
PHRF1-204ENST00000532550 DMDP11532 3685 aa18.28■□□□□ 0.52
PHRF1-204ENST00000532550 CCDC130P13994 396 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 CD58P19256 250 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 IFNAR2P48551 515 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 PMS1P54277 932 aaKnown RBP18.27■□□□□ 0.52
PHRF1-204ENST00000532550 INCA1Q0VD86 236 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 ZNF77Q15935 545 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 DCAF17Q5H9S7 520 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-204ENST00000532550 RIN3Q8TB24 985 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 ATRIPQ8WXE1 791 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 OVCA2Q8WZ82 227 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 EXOC4Q96A65 974 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 CYFIP2Q96F07 1278 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 KRT82Q9NSB4 513 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 HMGXB4Q9UGU5 601 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 FAM186AA6NE01 2351 aa18.27■□□□□ 0.52
PHRF1-204ENST00000532550 TRIM49BA6NDI0 452 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 LMNAP02545 664 aaKnown RBP18.26■□□□□ 0.51
PHRF1-204ENST00000532550 ARSAP15289 507 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 TCF3P15923 654 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 ADORA2BP29275 332 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 CXCL12P48061 93 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 CCR3P51677 355 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 NR1H3Q13133 447 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 TSSK4Q6SA08 328 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 SYNPOQ8N3V7 929 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 CPA6Q8N4T0 437 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 TTC39CQ8N584 583 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 SCAMP5Q8TAC9 235 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 SEMA4DQ92854 862 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 FAXDC2Q96IV6 333 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 HNRNPABQ99729 332 aaKnown RBP18.26■□□□□ 0.51
PHRF1-204ENST00000532550 SMOQ99835 787 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 RNF38Q9H0F5 515 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 ECT2Q9H8V3 914 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
PHRF1-204ENST00000532550 CHMP5Q9NZZ3 219 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 ARMCX3Q9UH62 379 aaPredicted RBP18.26■□□□□ 0.51
PHRF1-204ENST00000532550 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
PHRF1-204ENST00000532550 OTOL1A6NHN0 477 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 LEFTY2O00292 366 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 TNFRSF10BO14763 440 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 CILPO75339 1184 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 FAM200BP0CF97 657 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 SLC5A3P53794 718 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 NRLP54845 237 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 SLC7A9P82251 487 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 GRSF1Q12849 480 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 USP4Q13107 963 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 ZC3H3Q8IXZ2 948 aaKnown RBP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 SPEM1Q8N4L4 309 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 TWNKQ96RR1 684 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 FAM126AQ9BYI3 521 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 LINC00597Q9H2U6 94 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 FBXO44Q9H4M3 255 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 METTL14Q9HCE5 456 aaKnown RBP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 CSNK1G1Q9HCP0 422 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 PRMT8Q9NR22 394 aaPredicted RBP18.25■□□□□ 0.51
PHRF1-204ENST00000532550 ZSCAN32Q9NX65 697 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 IL37Q9NZH6 218 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 PCDHGA2Q9Y5H1 932 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 WNT6Q9Y6F9 365 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 VPS13AQ96RL7 3174 aa18.25■□□□□ 0.51
PHRF1-204ENST00000532550 FANCMQ8IYD8 2048 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
PHRF1-204ENST00000532550 BEST1O76090 585 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 OAS1P00973 400 aaKnown RBP18.24■□□□□ 0.51
PHRF1-204ENST00000532550 MBL2P11226 248 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-204ENST00000532550 CD44P16070 742 aaKnown RBP18.24■□□□□ 0.51
PHRF1-204ENST00000532550 EML3Q32P44 896 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 ZNF394Q53GI3 561 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 HECTD3Q5T447 861 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 KLHL10Q6JEL2 608 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 FILIP1Q7Z7B0 1213 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 ZMIZ2Q8NF64 920 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms