RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MORF4L2Q15014 288 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 CCDC14Q49A88 953 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 IZUMO3Q5VZ72 239 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 TXNRD3NBQ6F5E7 133 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 TMEM130Q8N3G9 435 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 PGBD4Q96DM1 585 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 CFHR5Q9BXR6 569 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 EPB41L4BQ9H329 900 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 SEMA4AQ9H3S1 761 aa15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 TPX2Q9ULW0 747 aaKnown RBP15.47■□□□□ 0.07
ECHDC1-220ENST00000528402 ARHGEF37A1IGU5 675 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 CYB561D2O14569 222 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 PTGESO14684 152 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 GABRDO14764 452 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 MDM4O15151 490 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 TCEA3O75764 348 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 AGTP01019 485 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 GNRH1P01148 92 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 CHRNA1P02708 482 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 ASGR1P07306 291 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 PRKCZQ05513 592 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 SOX4Q06945 474 aaPredicted RBP15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 KCNA10Q16322 511 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM26DQ5JW98 314 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 KCTD16Q68DU8 428 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 RFX6Q8HWS3 928 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 ZCCHC9Q8N567 271 aaKnown RBP15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 PPP1R13LQ8WUF5 828 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 KCTD13Q8WZ19 329 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 CENPIQ92674 756 aaPredicted RBP15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 TTC25Q96NG3 672 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 DUSP16Q9BY84 665 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 FAM49BQ9NUQ9 324 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 KLHL11Q9NVR0 708 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 PCSK1NQ9UHG2 260 aa15.46■□□□□ 0.07
ECHDC1-220ENST00000528402 SPTLC1O15269 473 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 TP73O15350 636 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 PAPSS1O43252 624 aaPredicted RBP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 PDGFRBP09619 1106 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 FGFR1P11362 822 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 ZFXP17010 805 aaPredicted RBP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 RGS7P49802 495 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 ARSEP51690 589 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 PPP2R2AP63151 447 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 CCSAPQ6IQ19 270 aaPredicted RBP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 MFSD5Q6N075 450 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 C4orf22Q6V702 233 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 RNF180Q86T96 592 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 PSTKQ8IV42 348 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 B3GALNT2Q8NCR0 500 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 OR2W6PQ8NHA6 318 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 KHSRPQ92945 711 aaKnown RBP eCLIP15.45■□□□□ 0.062e-12■■■□□ 17
ECHDC1-220ENST00000528402 TLCD1Q96CP7 247 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 SERPINB12Q96P63 405 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 CDC42EP4Q9H3Q1 356 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 PPCSQ9HAB8 311 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 CALCOCO1Q9P1Z2 691 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 BCCIPQ9P287 314 aaKnown RBP eCLIP15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 NME7Q9Y5B8 376 aa15.45■□□□□ 0.06
ECHDC1-220ENST00000528402 CFAP69A5D8W1 941 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 RASGRF2O14827 1237 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 MCF2LO15068 1137 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 EIF3HO15372 352 aaKnown RBP eCLIP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 RGS16O15492 202 aaPredicted RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 PTPN1P18031 435 aaKnown RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 TGM2P21980 687 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 MDH1P40925 334 aaKnown RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 CDH6P55285 790 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 GNGT1P63211 74 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 OTUD4Q01804 1114 aaKnown RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 KRT81Q14533 505 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 TRIP13Q15645 432 aaPredicted RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 PTGISQ16647 500 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 ZSCAN26Q16670 478 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 SMTNL2Q2TAL5 461 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 P3H1Q32P28 736 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 KCNT1Q5JUK3 1230 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 STRADAQ7RTN6 431 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 CCDC25Q86WR0 208 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 SCUBE3Q8IX30 993 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 ACTL9Q8TC94 416 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 HSPH1Q92598 858 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 ZBTB9Q96C00 473 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 RNF157Q96PX1 679 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 ARHGAP39Q9C0H5 1083 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 DPEP3Q9H4B8 488 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 AAASQ9NRG9 546 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 NOVA2Q9UNW9 492 aaKnown RBP15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 SHOC2Q9UQ13 582 aa15.44■□□□□ 0.06
ECHDC1-220ENST00000528402 SGK1O00141 431 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ZNF189O75820 626 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 FBXO21O94952 628 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ABHD2P08910 425 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 LMO2P25791 158 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 ADORA2BP29275 332 aa15.43■□□□□ 0.06
ECHDC1-220ENST00000528402 GPS1Q13098 491 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms