RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 COLCA1Q6ZS62 124 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 DCP1BQ8IZD4 617 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 PELI3Q8N2H9 469 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 SIRT6Q8N6T7 355 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 ZNF398Q8TD17 642 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 PRR25Q96S07 402 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 SLCO5A1Q9H2Y9 848 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 TXLNGQ9NUQ3 528 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 AMFRQ9UKV5 643 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 PCDHA6Q9UN73 950 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 SHOC2Q9UQ13 582 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 TMA7Q9Y2S6 64 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 PLEKHM1Q9Y4G2 1056 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 HS3ST3B1Q9Y662 390 aa3.51□□□□□ -1.85
ECHDC1-219ENST00000526299 GABRDO14764 452 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 TLR2O60603 784 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 RNF8O76064 485 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 FGAP02671 866 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 T-ENOLP0DO92 83 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 MAP2K6P52564 334 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 COPB1P53618 953 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 SOX8P57073 446 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 PSG6Q00889 435 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 ID2Q02363 134 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 MYO1EQ12965 1108 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 PTPN21Q16825 1174 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 GIMAP6Q6P9H5 292 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 IZUMO1Q8IYV9 350 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 ABRAQ8N0Z2 381 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 BRIX1Q8TDN6 353 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 CXorf36Q9H7Y0 433 aa3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 TRMT13Q9NUP7 481 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-219ENST00000526299 C4orf47A7E2U8 309 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 PSMD9O00233 223 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 MT-CO3P00414 261 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 GUCY2FP51841 1108 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 KRT85P78386 507 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 KRT17Q04695 432 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 MTMR1Q13613 665 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 PLS1Q14651 629 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 KHDC1LQ5JSQ8 128 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 TMEM65Q6PI78 240 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 LVRNQ6Q4G3 990 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 SFTPA1Q8IWL2 248 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 ADHFE1Q8IWW8 467 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 ARFGAP1Q8N6T3 406 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 PNISRQ8TF01 805 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 FAM167AQ96KS9 214 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 MLXIPQ9HAP2 919 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 LPAR3Q9UBY5 353 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 TMX2Q9Y320 296 aa3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.49□□□□□ -1.85
ECHDC1-219ENST00000526299 MYO1CO00159 1063 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 TGFB3P10600 412 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 THBS4P35443 961 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 VIPR2P41587 438 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 UCP3P55916 312 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 SEC23BQ15437 767 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 ZIK1Q3SY52 487 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 C4orf46Q504U0 113 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 DAB2IPQ5VWQ8 1189 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 DEF8Q6ZN54 512 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 USP45Q70EL2 814 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 LIX1LQ8IVB5 337 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 PRR18Q8N4B5 295 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 PPP2R3CQ969Q6 453 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 MTMR8Q96EF0 704 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 ZPBPQ9BS86 351 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 C17orf80Q9BSJ5 609 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 SARS2Q9NP81 518 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 ATP8A1Q9Y2Q0 1164 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 PRKAB1Q9Y478 270 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 SNX14Q9Y5W7 946 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 FER1L4A9Z1Z3 1794 aa3.48□□□□□ -1.85
ECHDC1-219ENST00000526299 TNKSO95271 1327 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 EME2A4GXA9 379 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 DTNBO60941 627 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 TULP3O75386 442 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 PMPCBO75439 489 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 KATNA1O75449 491 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 ZRANB2O95218 330 aaKnown RBP eCLIP3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 CTSAP10619 480 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 PHKG2P15735 406 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 GKP32189 559 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 DGKEP52429 567 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 PRKAG1P54619 331 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 NKX6-1P78426 367 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 TMTC4Q5T4D3 741 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 EMC10Q5UCC4 262 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 ANO7Q6IWH7 933 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 RANBP10Q6VN20 620 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 C16orf71Q8IYS4 520 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 TMEM171Q8WVE6 324 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 SLC35A4Q96G79 324 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms