RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 IFNAR2P48551 515 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 ATXN3P54252 364 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 MCL1Q07820 350 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SRSF1Q07955 248 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 MYO1EQ12965 1108 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 GRIK2Q13002 908 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 NOLC1Q14978 699 aaKnown RBP eCLIP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 VEPH1Q14D04 833 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 DDR2Q16832 855 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 C9orf57Q5W0N0 161 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 RESP18Q5W5W9 173 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SHC4Q6S5L8 630 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 ENGASEQ8NFI3 743 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SPPL2BQ8TCT7 592 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 KIFAP3Q92845 792 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 ZNF419Q96HQ0 510 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SPACA7Q96KW9 195 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 IFT74Q96LB3 600 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 MYRFLQ96LU7 910 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 GCNAQ96QF7 691 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 PKMYT1Q99640 499 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 HNRNPABQ99729 332 aaKnown RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 RUSC1Q9BVN2 902 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SEMA4CQ9C0C4 833 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 SLC6A17Q9H1V8 727 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 TMEM206Q9H813 350 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 ABI2Q9NYB9 513 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 CALCOCO1Q9P1Z2 691 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 UBQLN1Q9UMX0 589 aaKnown RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 MAGED2Q9UNF1 606 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 APOBEC2Q9Y235 224 aaKnown RBP8.59□□□□□ -1.03
CSMD1-209ENST00000520630 PCDHB9Q9Y5E1 797 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 AHCTF1Q8WYP5 2266 aa8.59□□□□□ -1.03
CSMD1-209ENST00000520630 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TRIM24O15164 1050 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 AP5Z1O43299 807 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 HCRTO43612 131 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 HIP1RO75146 1068 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TOM1L1O75674 476 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 ALDH1A2O94788 518 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 KAT7O95251 611 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 CMA1P23946 247 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 CYP2F1P24903 491 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 EIF2S3P41091 472 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 PRPHP41219 470 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 DPP6P42658 865 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 ABCG1P45844 678 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 DHCR24Q15392 516 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 PLEKHG6Q3KR16 790 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 WSCD1Q658N2 575 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 ARL6IP4Q66PJ3 421 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 ARMCX5Q6P1M9 558 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 RHBDF2Q6PJF5 856 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 KCNK18Q7Z418 384 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 APBB1IPQ7Z5R6 666 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TRIML1Q8N9V2 468 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 LSM14AQ8ND56 463 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TMEM161BQ8NDZ6 487 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TTC16Q8NEE8 873 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 MRPS31Q92665 395 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TRMT2BQ96GJ1 504 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 HSPA12BQ96MM6 686 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 NTPCRQ9BSD7 190 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TCHPQ9BT92 498 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 PI4K2AQ9BTU6 479 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 RNF38Q9H0F5 515 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 PLEKHA5Q9HAU0 1116 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 KMT5AQ9NQR1 393 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 HPSEQ9Y251 543 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
CSMD1-209ENST00000520630 SLCO1B1Q9Y6L6 691 aa8.58□□□□□ -1.04
CSMD1-209ENST00000520630 A0A1B0GVL5 298 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 GOLGA6L4A6NEF3 574 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 E9PMD0 336 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 LEFTY2O00292 366 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 LAD1O00515 517 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 TRIM66O15016 1216 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 SYPP08247 313 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 NFICP08651 508 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 OR52Z1P0C646 297 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 USP17L7P0C7H9 530 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 CSH1P0DML2 217 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 CSH2P0DML3 217 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
CSMD1-209ENST00000520630 ODC1P11926 461 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 NDUFV2P19404 249 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 CLDN6P56747 220 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 SMAD1Q15797 465 aaKnown RBP8.57□□□□□ -1.04
CSMD1-209ENST00000520630 PTPRNQ16849 979 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 JADE1Q6IE81 842 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 SLC39A4Q6P5W5 647 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 C1orf186Q6ZWK4 172 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 USP49Q70CQ1 688 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms