RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ATG2BQ96BY7 2078 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 PTPRDP23468 1912 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 AKAP3O75969 853 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 EPN2O95208 641 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 SLFN14P0C7P3 912 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 SLC7A9P82251 487 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.17
CSMD1-207ENST00000520451 PKP1Q13835 747 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 DMC1Q14565 340 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 CCDC6Q16204 474 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 ZNF699Q32M78 642 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 AASDHQ4L235 1098 aaPredicted RBP16.14■□□□□ 0.17
CSMD1-207ENST00000520451 SCARA5Q6ZMJ2 495 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 SYT13Q7L8C5 426 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 FILIP1Q7Z7B0 1213 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 RNF38Q9H0F5 515 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 SDK1Q7Z5N4 2213 aa16.14■□□□□ 0.17
CSMD1-207ENST00000520451 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
CSMD1-207ENST00000520451 LRRIQ3A6PVS8 624 aaPredicted RBP16.13■□□□□ 0.17
CSMD1-207ENST00000520451 SCAMP3O14828 347 aaKnown RBP16.13■□□□□ 0.17
CSMD1-207ENST00000520451 ACTN4O43707 911 aaKnown RBP16.13■□□□□ 0.17
CSMD1-207ENST00000520451 KLRC4O43908 158 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 APBB3O95704 486 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 OLFM2O95897 454 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 OAS1P00973 400 aaKnown RBP16.13■□□□□ 0.17
CSMD1-207ENST00000520451 OPRD1P41143 372 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 RAP1GAPP47736 663 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 AP3M2P53677 418 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 CDH8P55286 799 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 SEC13P55735 322 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 STK4Q13043 487 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 NCOA4Q13772 614 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 ZNF667Q5HYK9 610 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 NUP93Q8N1F7 819 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 CCDC26Q8TAB7 109 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 FBXO32Q969P5 355 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 PAGE5Q96GU1 130 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 MED10Q9BTT4 135 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 VRTNQ9H8Y1 702 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 CFAP97Q9P2B7 532 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
CSMD1-207ENST00000520451 SLC9A3R1O14745 358 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 RTN3O95197 1032 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 CYP17A1P05093 508 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 MBL2P11226 248 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 YWHAQP27348 245 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 KMT5BQ4FZB7 885 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 PPM1JQ5JR12 505 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 FAM35AQ86V20 835 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 DDX42Q86XP3 938 aaKnown RBP eCLIP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
CSMD1-207ENST00000520451 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 TNIP3Q96KP6 325 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 RCOR1Q9UKL0 485 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 RALGAPA1Q6GYQ0 2036 aa16.12■□□□□ 0.17
CSMD1-207ENST00000520451 K7EQS6 105 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 VNN1O95497 513 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 C4BPAP04003 597 aaKnown RBP16.11■□□□□ 0.17
CSMD1-207ENST00000520451 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 CLDN10P78369 228 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 DHCR24Q15392 516 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 GAB4Q2WGN9 574 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 PLK5Q496M5 336 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 C2orf27AQ580R0 203 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 KIAA1958Q8N8K9 716 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 TSTD1Q8NFU3 115 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 OVCA2Q8WZ82 227 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 ZC3H10Q96K80 434 aaKnown RBP16.11■□□□□ 0.17
CSMD1-207ENST00000520451 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 DMAP1Q9NPF5 467 aaPredicted RBP16.11■□□□□ 0.17
CSMD1-207ENST00000520451 DMAC2Q9NW81 257 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 EBF1Q9UH73 591 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 PCDHGA5Q9Y5G8 931 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
CSMD1-207ENST00000520451 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 DCLK1O15075 740 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 NR3C1P04150 777 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 P4HA1P13674 534 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 PFKFB1P16118 471 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 KCNA4P22459 653 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 MPLP40238 635 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 DGKEP52429 567 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 SLC5A3P53794 718 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 DLG4P78352 724 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 ELF2Q15723 593 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 IL31Q6EBC2 164 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 PAQR9Q6ZVX9 377 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 ACOT1Q86TX2 421 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 ADGRG2Q8IZP9 1017 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 SCAMP5Q8TAC9 235 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
CSMD1-207ENST00000520451 DUSP15Q9H1R2 295 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms