RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 GLB1L3Q8NCI6 653 aaPredicted RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 NUP133Q8WUM0 1156 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 SNX33Q8WV41 574 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 RPS6KC1Q96S38 1066 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 NAP1L4Q99733 375 aaKnown RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 XPO4Q9C0E2 1151 aaKnown RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 ANKRD2Q9GZV1 360 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 NRDE2Q9H7Z3 1164 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 ZNF287Q9HBT7 754 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 PCDH12Q9NPG4 1184 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 PIH1D3Q9NQM4 214 aaKnown RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 RMND1Q9NWS8 449 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 RAI14Q9P0K7 980 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 GABBR1Q9UBS5 961 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 NRBP1Q9UHY1 535 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 ANAPC4Q9UJX5 808 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 HPSEQ9Y251 543 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 SRPRBQ9Y5M8 271 aaKnown RBP5.71□□□□□ -1.5
HDAC2-204ENST00000518756 WNK3Q9BYP7 1800 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 PHLPP2Q6ZVD8 1323 aa5.71□□□□□ -1.5
HDAC2-204ENST00000518756 MYH6P13533 1939 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TRIM75PA6NK02 468 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 GPR39O43194 453 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PRPF3O43395 683 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 STX10O60499 249 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DTNBO60941 627 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DNAJC6O75061 913 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TMEM127O75204 238 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 MTHFD2P13995 350 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CTSSP25774 331 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 HOXA7P31268 230 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CASQ1P31415 396 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PPP1R2P41236 205 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TRAPPC10P48553 1259 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 GNAQP50148 359 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CCZ1BP86790 482 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CCZ1P86791 482 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TMPRSS15P98073 1019 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 SLC25A3Q00325 362 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 GPS2Q13227 327 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 STIM1Q13586 685 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TRIM14Q14142 442 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PTPAQ15257 358 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TEX35Q5T0J7 233 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 GJC2Q5T442 439 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 UTP14CQ5TAP6 766 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TAF3Q5VWG9 929 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 C1QL3Q5VWW1 255 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 JAKMIP3Q5VZ66 844 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 OTUD7BQ6GQQ9 843 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 ZNF280DQ6N043 979 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PCSK4Q6UW60 755 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DOK3Q7L591 496 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 C11orf96Q7Z7L8 435 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PCGF5Q86SE9 256 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 SPATS2Q86XZ4 545 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TBC1D10CQ8IV04 446 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DIS3L2Q8IYB7 885 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 LMBR1Q8WVP7 490 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PHKBQ93100 1093 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CCDC51Q96ER9 411 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 MAP3K14Q99558 947 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CPPED1Q9BRF8 314 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 BRIP1Q9BX63 1249 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 CRNKL1Q9BZJ0 848 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 FTOQ9C0B1 505 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 ARMT1Q9H993 441 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 SPC25Q9HBM1 224 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 TRMT1Q9NXH9 659 aaKnown RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 DPP7Q9UHL4 492 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 FBXO9Q9UK97 447 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 EDARQ9UNE0 448 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 NIP7Q9Y221 180 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 ZBTB1Q9Y2K1 713 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDAC2-204ENST00000518756 UBN2Q6ZU65 1347 aa5.7□□□□□ -1.5
HDAC2-204ENST00000518756 PHLPP1O60346 1717 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 TMEM191CA6NGB0 347 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 KIF28PB7ZC32 967 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 POLR2DO15514 142 aaKnown RBP5.69□□□□□ -1.5
HDAC2-204ENST00000518756 ATP8B1O43520 1251 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 FAM20BO75063 409 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 PHF2O75151 1096 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 KIF20AO95235 890 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 CFBP00751 764 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 GASTP01350 101 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 TUBBP07437 444 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 KRT4P19013 534 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 EIF5P55010 431 aaKnown RBP5.69□□□□□ -1.5
HDAC2-204ENST00000518756 GSTO1P78417 241 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 GABPB1Q06547 395 aaPredicted RBP5.69□□□□□ -1.5
HDAC2-204ENST00000518756 CHRNDQ07001 517 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 RABL3Q5HYI8 236 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 SUSD4Q5VX71 490 aa5.69□□□□□ -1.5
HDAC2-204ENST00000518756 RNF219Q5W0B1 726 aaPredicted RBP5.69□□□□□ -1.5
HDAC2-204ENST00000518756 SPECC1LQ69YQ0 1117 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms