RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 URODP06132 367 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 LCP1P13796 627 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 CPB1P15086 417 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 MYOGP15173 224 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
PABPC1-203ENST00000517921 CYP2F1P24903 491 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 CTNNB1P35222 781 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 SCNN1AP37088 669 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 MAGEA11P43364 429 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 RPL7AP62424 266 aaKnown RBP11.13□□□□□ -0.63
PABPC1-203ENST00000517921 ROR1Q01973 937 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 OGDHQ02218 1023 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 TAP1Q03518 808 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 ADIGQ0VDE8 80 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 RAB41Q5JT25 222 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 FAM102AQ5T9C2 384 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-203ENST00000517921 OR6B2Q6IFH4 312 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 DAAM2Q86T65 1068 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 GPR65Q8IYL9 337 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 SYCE1Q8N0S2 351 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 VPS52Q8N1B4 723 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 KLHL23Q8NBE8 558 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 KIF18AQ8NI77 898 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 JOSD2Q8TAC2 188 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 FEZF2Q8TBJ5 459 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 CLEC4CQ8WTT0 213 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 STK39Q9UEW8 545 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 PCDHB5Q9Y5E4 795 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
PABPC1-203ENST00000517921 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CTAGE9A4FU28 777 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 TMEM191CA6NGB0 347 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 C2CD2LO14523 706 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 ENC1O14682 589 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 NCK2O43639 380 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 LILRB3O75022 631 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CTSAP10619 480 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 DNAJB2P25686 324 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 BMPR1AP36894 532 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 ARPP19P56211 112 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SNX16P57768 344 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 AMPD2Q01433 879 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 KRT17Q04695 432 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 MESDQ14696 234 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 PTPROQ16827 1216 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 TRNP1Q6NT89 227 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 DCUN1D2Q6PH85 259 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 RNF19BQ6ZMZ0 732 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SLC26A9Q7LBE3 791 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SPRED2Q7Z698 418 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 NT5DC3Q86UY8 548 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 ZDHHC17Q8IUH5 632 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SCUBE3Q8IX30 993 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 ATAD1Q8NBU5 361 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 SPPL2BQ8TCT7 592 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 FNIP1Q8TF40 1166 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 C2orf15Q8WU43 125 aaKnown RBP11.12□□□□□ -0.63
PABPC1-203ENST00000517921 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.635e-10■■□□□ 12.7
PABPC1-203ENST00000517921 TIFAQ96CG3 184 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 GUCD1Q96NT3 240 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CDX2Q99626 313 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 C17orf80Q9BSJ5 609 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 PLVAPQ9BX97 442 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 LRRC4Q9HBW1 653 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 MSRAQ9UJ68 235 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 TMEM59LQ9UK28 342 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 JRKLQ9Y4A0 524 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 HYOU1Q9Y4L1 999 aa11.12□□□□□ -0.63
PABPC1-203ENST00000517921 NOTCH4Q99466 2003 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 DOCK4Q8N1I0 1966 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 TMEM110-MUSTN1A8MSY1 372 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 C5orf67F2Z3F1 127 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 MYO1FO00160 1098 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 TNFRSF10BO14763 440 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 TRIM66O15016 1216 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 PROSCO94903 275 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 KRT3P12035 628 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 COMTP21964 271 aa11.11□□□□□ -0.63
PABPC1-203ENST00000517921 MAN1A1P33908 653 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms