RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 POMGNT1Q8WZA1 660 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 ABHD17AQ96GS6 310 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMX3Q96JJ7 454 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZNF560Q96MR9 790 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 LRRC3BQ96PB8 259 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 SMG9Q9H0W8 520 aaKnown RBP9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 NDFIP2Q9NV92 336 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 PCDHB5Q9Y5E4 795 aa9.58□□□□□ -0.88
CDC42SE2-212ENST00000515533 KPNA7A9QM74 516 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 TISP43B9A030 160 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ANKRD63C9JTQ0 380 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ATG13O75143 517 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 IL18RAPO95256 599 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ADRB1P08588 477 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 HAPLN1P10915 354 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ITGB7P26010 798 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 DDX6P26196 483 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 HOXA6P31267 233 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 PNPLA4P41247 253 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 POU5F1Q01860 360 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 GRSF1Q12849 480 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 POSTNQ15063 836 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZC2HC1CQ53FD0 456 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 C4orf17Q53FE4 359 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 PPM1JQ5JR12 505 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 WSCD1Q658N2 575 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 CC2D1AQ6P1N0 951 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 WDR5BQ86VZ2 330 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 MAB21L3Q8N8X9 362 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 LRRC15Q8TF66 581 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 MRPS31Q92665 395 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 HVCN1Q96D96 273 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 FIZ1Q96SL8 496 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 SLC46A2Q9BY10 475 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCSER1Q9C0I3 900 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 ST6GALNAC4Q9H4F1 302 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 KIF9Q9HAQ2 790 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 GKN1Q9NS71 199 aa9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 MAGED2Q9UNF1 606 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-212ENST00000515533 KRTAP4-8A0A0G2JLE6 195 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 HUS1O60921 280 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 PRPF40AO75400 957 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 RPP40O75818 363 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CSH1P0DML2 217 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CSH2P0DML3 217 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 EPXP11678 715 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 MSX1P28360 303 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 DDIT3P35638 169 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 TXLNAP40222 546 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CHRNA4P43681 627 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 NLRP12P59046 1061 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CTBSQ01459 385 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 GRIN1Q05586 938 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 RUNX3Q13761 415 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 SF3A1Q15459 793 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 NFE2Q16621 373 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 AASDHQ4L235 1098 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 EFHC2Q5JST6 749 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 IL31Q6EBC2 164 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 DYMQ7RTS9 669 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 LRRTM3Q86VH5 581 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 SFR1Q86XK3 245 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 EFCAB13Q8IY85 973 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 C12orf50Q8NA57 414 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 DDX1Q92499 740 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 BTBD6Q96KE9 485 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 EBF3Q9H4W6 596 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 MRPL44Q9H9J2 332 aaKnown RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 TDP1Q9NUW8 608 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 C2orf42Q9NWW7 574 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 UXTQ9UBK9 157 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCDC39Q9UFE4 941 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 EXOC7Q9UPT5 735 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 STYXL1Q9Y6J8 313 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 CFAP47Q6ZTR5 3102 aa9.56□□□□□ -0.88
CDC42SE2-212ENST00000515533 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 ASCC3Q8N3C0 2202 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 PLXND1Q9Y4D7 1925 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 CCDC163A0A0D9SF12 145 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 EXTL3O43909 919 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 BNIP3LO60238 219 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 ITGB3P05106 788 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 CKMP06732 381 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 POLR2BP30876 1174 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 PXNP49023 591 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 DGKGP49619 791 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 RPL10AP62906 217 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 TFAMQ00059 246 aaKnown RBP9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 MYL7Q01449 175 aa9.55□□□□□ -0.88
CDC42SE2-212ENST00000515533 TMEM196Q5HYL7 178 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms