RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 NUP93Q8N1F7 819 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF248Q8NDW4 579 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF680Q8NEM1 530 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 TANKQ92844 425 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 IFT74Q96LB3 600 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 CEP19Q96LK0 163 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 YIPF4Q9BSR8 244 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 KIFC3Q9BVG8 833 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 VPS16Q9H269 839 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 SPACA1Q9HBV2 294 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 NKIRAS2Q9NYR9 191 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 GOLGA8BA8MQT2 603 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 TARM1B6A8C7 271 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 GPR37L1O60883 481 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 GNAI3P08754 354 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 PABPC1P11940 636 aaKnown RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ME1P48163 572 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 HK2P52789 917 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 KCNJ10P78508 379 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 IFRD2Q12894 506 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 HNRNPDQ14103 355 aaKnown RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ACAP2Q15057 778 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ZCCHC12Q6PEW1 402 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 UNC45BQ8IWX7 931 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 TCEAL8Q8IYN2 117 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 POMGNT1Q8WZA1 660 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF274Q96GC6 653 aaPredicted RBP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 HAPLN3Q96S86 360 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 SEC22CQ9BRL7 303 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 OR6C2Q9NZP2 312 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 BTBD7Q9P203 1132 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 SPATA2Q9UM82 520 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 RFX7Q2KHR2 1363 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PCM1Q15154 2024 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PHLPP2Q6ZVD8 1323 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ABHD14A-ACY1A0A1B0GW23 586 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 SLC9A3R1O14745 358 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 IFIT3O14879 490 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PDE5AO76074 875 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TBX18O95935 607 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 LONP1P36776 959 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 KCNJ6P48051 423 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ACADVLP49748 655 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 SCARB2Q14108 478 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TCTE1Q5JU00 501 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 MANEAQ5SRI9 462 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 RETSATQ6NUM9 610 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 SYDE1Q6ZW31 735 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TRMT44Q8IYL2 757 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PDZD8Q8NEN9 1154 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 RAB7BQ96AH8 199 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 MTFMTQ96DP5 389 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TMA16Q96EY4 203 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PPM1MQ96MI6 270 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 OLFM3Q96PB7 478 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 OPALINQ96PE5 141 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 BCL2L14Q9BZR8 327 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 STRN4Q9NRL3 753 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 NDUFA13Q9P0J0 144 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TRAV20A0A0B4J274 112 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PMS2P1A4D2B8 440 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PCDH17O14917 1159 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 AREL1O15033 823 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 DKC1O60832 514 aaKnown RBP eCLIP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 TRIM16O95361 564 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PLEKHA8P1O95397 391 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ANPEPP15144 967 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 SNTA1Q13424 505 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 GRIK5Q16478 980 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PFKFB3Q16875 520 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 CNPY1Q3B7I2 92 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 SGO2Q562F6 1265 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 FIGNQ5HY92 759 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 CDKL4Q5MAI5 379 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 LRRC8BQ6P9F7 803 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PIK3AP1Q6ZUJ8 805 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 MIGA2Q7L4E1 593 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 MAEAQ7L5Y9 396 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ITIH5Q86UX2 942 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 MAP4K3Q8IVH8 894 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PLD6Q8N2A8 252 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 ST13P5Q8NFI4 369 aaPredicted RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 KRT35Q92764 455 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 PTPRN2Q92932 1015 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 EDEM2Q9BV94 578 aa7.53□□□□□ -1.2
NIPBL-208ENST00000514335 UNKQ9C0B0 810 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 WDR12Q9GZL7 423 aaKnown RBP7.53□□□□□ -1.2
NIPBL-208ENST00000514335 RNF38Q9H0F5 515 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms