RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
SFXN1-210ENST00000513725 CHPFQ8IZ52 775 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 SLC6A17Q9H1V8 727 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
SFXN1-210ENST00000513725 TADA3O75528 432 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 SLITRK3O94933 977 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ODC1P11926 461 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 HDCP19113 662 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 GRIA4P48058 902 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 CDR1P51861 262 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ATP2C1P98194 919 aaPredicted RBP12.76□□□□□ -0.37
SFXN1-210ENST00000513725 INSM1Q01101 510 aaPredicted RBP12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
SFXN1-210ENST00000513725 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 SNX19Q92543 992 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
SFXN1-210ENST00000513725 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 TUBGCP4Q9UGJ1 667 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 ADAMTS1Q9UHI8 967 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 TNFSF13BQ9Y275 285 aa12.76□□□□□ -0.37
SFXN1-210ENST00000513725 LEFTY2O00292 366 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 SLC37A4O43826 429 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 PPFIA2O75334 1257 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 LYPLA2O95372 231 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 ITGAVP06756 1048 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 TNFRSF8P28908 595 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 NAMPTP43490 491 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 LSSP48449 732 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 FOSBP53539 338 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 BTBD8Q5XKL5 378 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 RHBDF2Q6PJF5 856 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 FBN3Q75N90 2809 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 GATAD2AQ86YP4 633 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 LRRC15Q8TF66 581 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 GABRG3Q99928 467 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 CDT1Q9H211 546 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 KCNMB3Q9NPA1 279 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 OSGEPQ9NPF4 335 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 ITM2CQ9NQX7 267 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 USP36Q9P275 1121 aaKnown RBP12.75□□□□□ -0.37
SFXN1-210ENST00000513725 DEC1Q9P2X7 70 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 STARD13Q9Y3M8 1113 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 PCDHB1Q9Y5F3 818 aa12.75□□□□□ -0.37
SFXN1-210ENST00000513725 CITO14578 2027 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 MT-CO3P00414 261 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 ITGB2P05107 769 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 ABCB4P21439 1286 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 CDC27P30260 824 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 LRPAP1P30533 357 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 CTSKP43235 329 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 EFNA5P52803 228 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 NLRP5P59047 1200 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 GAD2Q05329 585 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 IGFBP7Q16270 282 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 EGFLAMQ63HQ2 1017 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 ADAT2Q7Z6V5 191 aaKnown RBP12.74□□□□□ -0.37
SFXN1-210ENST00000513725 MIB1Q86YT6 1006 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 EID2Q8N6I1 236 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
SFXN1-210ENST00000513725 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 PCED1AQ9H1Q7 454 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
SFXN1-210ENST00000513725 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.74□□□□□ -0.37
SFXN1-210ENST00000513725 RAD54BQ9Y620 910 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
SFXN1-210ENST00000513725 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 C2orf78A6NCI8 922 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 FAM87AP0C7U9 286 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
SFXN1-210ENST00000513725 E2F1Q01094 437 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 AKAP17AQ02040 695 aaKnown RBP12.73□□□□□ -0.37
SFXN1-210ENST00000513725 ORC1Q13415 861 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 ZSCAN23Q3MJ62 389 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 EXTL1Q92935 676 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 ACOX2Q99424 681 aa12.73□□□□□ -0.37
SFXN1-210ENST00000513725 EPN3Q9H201 632 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms