RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), human

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPA-208	ENST00000512064	CCT8L2	Q96SF2	557 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	CTRC	Q99895	268 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	FSD1	Q9BTV5	496 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	GON7	Q9BXV9	100 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	PACSIN1	Q9BY11	444 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	ANKRD2	Q9GZV1	360 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	RAB17	Q9H0T7	212 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	KAT14	Q9H8E8	782 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	NEK6	Q9HC98	313 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	TBC1D22B	Q9NU19	505 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	INTS10	Q9NVR2	710 aa	Known RBP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	EHD3	Q9NZN3	535 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	DLGAP2	Q9P1A6	1054 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	UBA2	Q9UBT2	640 aa	Predicted RBP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	DNAJB4	Q9UDY4	337 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	HMGXB4	Q9UGU5	601 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	RSL24D1	Q9UHA3	163 aa	Known RBP	4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	SH3BGRL2	Q9UJC5	107 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	L3MBTL1	Q9Y468	752 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	DTNA	Q9Y4J8	743 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	EID1	Q9Y6B2	187 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	MAD1L1	Q9Y6D9	718 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	NUP155	O75694	1391 aa		4.25	□□□□□ -1.73
GYPA-208	ENST00000512064	NKTR	P30414	1462 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	HFM1	A2PYH4	1435 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	POGZ	Q7Z3K3	1410 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TRAV6	A0A075B6T7	132 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ESYT3	A0FGR9	886 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SMCO2	A6NFE2	343 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	C5orf60	A6NFR6	353 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CCDC85C	A6NKD9	419 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CCT8L1P	A6NM43	557 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	UBXN8	O00124	270 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NDUFS8	O00217	210 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	DLL1	O00548	723 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	KPNA4	O00629	521 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	IRS4	O14654	1257 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CAPN9	O14815	690 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RGS13	O14921	159 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PER2	O15055	1255 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	KCNN4	O15554	427 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	HNRNPR	O43390	633 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ECE2	O60344	883 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	B4GALT4	O60513	344 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CUTA	O60888	179 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NOL3	O60936	208 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	AOC2	O75106	756 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	FGF18	O76093	207 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SEC31A	O94979	1220 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	OXSR1	O95747	527 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GUCA1C	O95843	209 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RET	P07949	1114 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GLI1	P08151	1106 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	H2AFB1	P0C5Y9	115 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	H2AFB2	P0C5Z0	115 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	THEGL	P0DJG4	465 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PDHB	P11177	359 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CDK4	P11802	303 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	POU2F1	P14859	743 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PRLR	P16471	622 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NAGA	P17050	411 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ITGA2	P17301	1181 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ITGB6	P18564	788 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	KRT15	P19012	456 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RPS6KB1	P23443	525 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	F8A1	P23610	371 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NTF4	P34130	210 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SOX6	P35712	828 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	VHL	P40337	213 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MDH1	P40925	334 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MTIF2	P46199	727 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PTDSS1	P48651	473 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CDK8	P49336	464 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CEBPA	P49715	358 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PMS1	P54277	932 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	EPHB4	P54760	987 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	EPHB1	P54762	984 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RPL10A	P62906	217 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CSNK2B	P67870	215 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	DLG4	P78352	724 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TMPRSS15	P98073	1019 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ID3	Q02535	119 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GBE1	Q04446	702 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SSRP1	Q08945	709 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	COASY	Q13057	564 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ADAM9	Q13443	819 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	KRR1	Q13601	381 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CUL4A	Q13619	759 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	COTL1	Q14019	142 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PPP2R5D	Q14738	602 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CRY1	Q16526	586 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	STX1A	Q16623	288 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PTGIS	Q16647	500 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	AKAP4	Q5JQC9	854 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	EXOSC6	Q5RKV6	272 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CLVS2	Q5SYC1	327 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms