RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 TMC8Q8IU68 726 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 SCN4BQ8IWT1 228 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 SUSD6Q92537 303 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
TRIO-212ENST00000508717 PDLIM2Q96JY6 352 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 NOX5Q96PH1 765 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 UBE2ZQ9H832 354 aaPredicted RBP13.89□□□□□ -0.19
TRIO-212ENST00000508717 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
TRIO-212ENST00000508717 UXTQ9UBK9 157 aaPredicted RBP13.89□□□□□ -0.19
TRIO-212ENST00000508717 CYTH4Q9UIA0 394 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 PATJQ8NI35 1801 aa13.89□□□□□ -0.19
TRIO-212ENST00000508717 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 TULP2O00295 520 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 CCL16O15467 120 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 GABBR2O75899 941 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 FGF19O95750 216 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 ZDHHC11BP0C7U3 371 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 SKILP12757 684 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 GSCP56915 257 aaPredicted RBP13.88□□□□□ -0.19
TRIO-212ENST00000508717 GSDMDP57764 484 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 SNX16P57768 344 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 CENPCQ03188 943 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 PDCLQ13371 301 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 CLEC16AQ2KHT3 1053 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 TAF3Q5VWG9 929 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 TMC5Q6UXY8 1006 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 ZNF276Q8N554 614 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 MAFAQ8NHW3 353 aaPredicted RBP13.88□□□□□ -0.19
TRIO-212ENST00000508717 HLA-CQ95604 372 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 IL21Q9HBE4 155 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 CNGB3Q9NQW8 809 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 DNMT3BQ9UBC3 853 aaKnown RBP13.88□□□□□ -0.19
TRIO-212ENST00000508717 SCML2Q9UQR0 700 aa13.88□□□□□ -0.19
TRIO-212ENST00000508717 COL6A3P12111 3177 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 DDX3XO00571 662 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRIO-212ENST00000508717 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 MMP8P22894 467 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 YWHAQP27348 245 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 SCNN1AP37088 669 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 MTHFRP42898 656 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 CDR1P51861 262 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 USP46P62068 366 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 PABPC1LQ4VXU2 614 aaKnown RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 ATAT1Q5SQI0 421 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 SDHAF4Q5VUM1 108 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 GPRIN1Q7Z2K8 1008 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 PHF13Q86YI8 300 aaPredicted RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 C12orf76Q8N812 135 aaPredicted RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 GIPC2Q8TF65 315 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 IRGQQ8WZA9 623 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 SMG7Q92540 1137 aaKnown RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 VCPIP1Q96JH7 1222 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 PPP1R13BQ96KQ4 1090 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 MIS12Q9H081 205 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 ISCUQ9H1K1 167 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 PDCL3Q9H2J4 239 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 WDR6Q9NNW5 1121 aaKnown RBP13.87□□□□□ -0.19
TRIO-212ENST00000508717 CD207Q9UJ71 328 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 ZMYM5Q9UJ78 669 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 NENFQ9UMX5 172 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 MYH10P35580 1976 aa13.87□□□□□ -0.19
TRIO-212ENST00000508717 ZNF197O14709 1029 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 SART1O43290 800 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 FBXO21O94952 628 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 F11P03951 625 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 RHOP08100 348 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 PLEKP08567 350 aaPredicted RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 PFKLP17858 780 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 PSEN1P49768 467 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 GOLGA8FQ08AF8 430 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 GOLGA8DPQ0D2H9 430 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 SMAD4Q13485 552 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 MTMR3Q13615 1198 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 PUS10Q3MIT2 529 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 PTPN20Q4JDL3 420 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 TDRD12Q587J7 1177 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 PRSS36Q5K4E3 855 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 BEND5Q7L4P6 421 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 TMEM150AQ86TG1 271 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 TMTC1Q8IUR5 882 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 CCDC170Q8IYT3 715 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 C1orf131Q8NDD1 294 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 SCAMP5Q8TAC9 235 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
TRIO-212ENST00000508717 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
TRIO-212ENST00000508717 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms