RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PLEKP08567 350 aaPredicted RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 FAM228BP0C875 321 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 SKILP12757 684 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 TNFAIP3P21580 790 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 BDNFP23560 247 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CYP2F1P24903 491 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CYLC1P35663 651 aaPredicted RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 PPP3CCP48454 512 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 KIF11P52732 1056 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 EPHA5P54756 1037 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CCZ1BP86790 482 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CCZ1P86791 482 aaPredicted RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 CYP27A1Q02318 531 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PDE4CQ08493 712 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 DUSP4Q13115 394 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PDCLQ13371 301 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ORC1Q13415 861 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 GOLGA7BQ2TAP0 167 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PM20D1Q6GTS8 502 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ACAD10Q6JQN1 1059 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ZNF662Q6ZS27 426 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 BEND5Q7L4P6 421 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PIGZQ86VD9 579 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 GLYCTKQ8IVS8 523 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ATAD1Q8NBU5 361 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 KREMEN2Q8NCW0 462 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 MSANTD4Q8NCY6 345 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 C1orf131Q8NDD1 294 aaKnown RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 MICAL1Q8TDZ2 1067 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 OVCA2Q8WZ82 227 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 IRGQQ8WZA9 623 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CASP10Q92851 521 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PSMG2Q969U7 264 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 TRIM11Q96F44 468 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 PCDHB18PQ96TA0 734 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CRISPLD1Q9H336 500 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 FBXO44Q9H4M3 255 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 TLE6Q9H808 572 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 CERS4Q9HA82 394 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 AVENQ9NQS1 362 aaPredicted RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 CNGB3Q9NQW8 809 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ABI2Q9NYB9 513 aaPredicted RBP9.12□□□□□ -0.95
USP46-207ENST00000508499 WDR35Q9P2L0 1181 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 ADAMTS1Q9UHI8 967 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 STRIP2Q9ULQ0 834 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 INSL5Q9Y5Q6 135 aa9.12□□□□□ -0.95
USP46-207ENST00000508499 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 MYO7AQ13402 2215 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 F8VP50 259 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CLDN5O00501 218 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 AKR1B10O60218 316 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 BEST1O76090 585 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 FBXO21O94952 628 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 NDUFA10O95299 355 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 SEC24AO95486 1093 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 GLI1P08151 1106 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CSH1P0DML2 217 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CSH2P0DML3 217 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 SRGAP2BP0DMP2 458 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 MYBL1P10243 752 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 ATF6P18850 670 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ADORA2BP29275 332 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ELF1P32519 619 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 EIF4A3P38919 411 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 NSFP46459 744 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 CACNA2D1P54289 1103 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 HYAL1Q12794 435 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 PTP4A2Q12974 167 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ADAM15Q13444 863 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CCDC142Q17RM4 750 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 LIN9Q5TKA1 542 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 SNX30Q5VWJ9 437 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 PMF1Q6P1K2 205 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 DENND1BQ6P3S1 775 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ALKBH5Q6P6C2 394 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 DENND5BQ6ZUT9 1274 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 MON1BQ7L1V2 547 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ADGRD2Q7Z7M1 963 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ITIH5Q86UX2 942 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 PALB2Q86YC2 1186 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 LEMD2Q8NC56 503 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 SECISBP2LQ93073 1101 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 KCNK16Q96T55 309 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 LPIN3Q9BQK8 851 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 MED10Q9BTT4 135 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 LUC7LQ9NQ29 371 aaKnown RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 ASNSD1Q9NWL6 643 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 CYTH4Q9UIA0 394 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 YIPF1Q9Y548 306 aa9.11□□□□□ -0.95
USP46-207ENST00000508499 EPN1Q9Y6I3 576 aaPredicted RBP9.11□□□□□ -0.95
USP46-207ENST00000508499 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms