RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 SERPINB3P29508 390 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 EFNA5P52803 228 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 HSDL1Q3SXM5 330 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CDHR3Q6ZTQ4 885 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 TTC13Q8NBP0 860 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 STK32AQ8WU08 396 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 TRIM56Q9BRZ2 755 aaKnown RBP16.73■□□□□ 0.27
DDX41-205ENST00000505081 TSSK1BQ9BXA7 367 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CADM1Q9BY67 442 aaKnown RBP16.73■□□□□ 0.27
DDX41-205ENST00000505081 SSU72Q9NP77 194 aaKnown RBP16.73■□□□□ 0.27
DDX41-205ENST00000505081 GPATCH2LQ9NWQ4 482 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 NFKBIEO00221 500 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 MICAL2O94851 1124 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 PTPN4P29074 926 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CDH6P55285 790 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 FAM102AQ5T9C2 384 aaPredicted RBP16.73■□□□□ 0.27
DDX41-205ENST00000505081 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 ANKRD36BP1Q96IX9 119 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 KCNK13Q9HB14 408 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDX41-205ENST00000505081 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 E5RJQ4 531 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 M0QYV0 167 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 GRM1Q13255 1194 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 ATF7IP2Q5U623 682 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 ZBTB8OSQ8IWT0 167 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 C1orf127Q8N9H9 656 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CMASQ8NFW8 434 aaPredicted RBP16.73■□□□□ 0.27
DDX41-205ENST00000505081 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 CYTH2Q99418 400 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 PPCSQ9HAB8 311 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 EFR3BQ9Y2G0 817 aa16.73■□□□□ 0.27
DDX41-205ENST00000505081 IQCF3P0C7M6 154 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 SESN3P58005 492 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 KHDC1Q4VXA5 237 aaKnown RBP16.72■□□□□ 0.27
DDX41-205ENST00000505081 ZNF667Q5HYK9 610 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 IER5Q5VY09 327 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 FAM160B1Q5W0V3 765 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 CDCA2Q69YH5 1023 aaPredicted RBP16.72■□□□□ 0.27
DDX41-205ENST00000505081 DNERQ8NFT8 737 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 MICAL1Q8TDZ2 1067 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 SEPT1Q8WYJ6 367 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 NAF1Q96HR8 494 aaKnown RBP16.72■□□□□ 0.27
DDX41-205ENST00000505081 MECRQ9BV79 373 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 TMEM120AQ9BXJ8 343 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 C19orf81C9J6K1 198 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 H7C0C1 242 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 TM9SF1O15321 606 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 ITGB3P05106 788 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 ETV4P43268 484 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 ATP5OP48047 213 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 CLCN3P51790 818 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 ROR1Q01973 937 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 MPZL3Q6UWV2 235 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 CTAGE3PQ8IX95 158 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 CCDC33Q8N5R6 958 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 TRIM55Q9BYV6 548 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 VPS11Q9H270 941 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 LHX5Q9H2C1 402 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
DDX41-205ENST00000505081 ARMCX1Q9P291 453 aa16.72■□□□□ 0.27
DDX41-205ENST00000505081 TNS1Q9HBL0 1735 aaKnown RBP16.72■□□□□ 0.27
DDX41-205ENST00000505081 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
DDX41-205ENST00000505081 UGT1A9O60656 530 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 RNF8O76064 485 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 ARFIP2P53365 341 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 ZNF200P98182 395 aaPredicted RBP16.71■□□□□ 0.27
DDX41-205ENST00000505081 PTPN11Q06124 597 aaPredicted RBP16.71■□□□□ 0.27
DDX41-205ENST00000505081 CYP4V2Q6ZWL3 525 aaPredicted RBP16.71■□□□□ 0.27
DDX41-205ENST00000505081 NCAPG2Q86XI2 1143 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 FAF2Q96CS3 445 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 FAXDC2Q96IV6 333 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 ADPGKQ9BRR6 497 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 UGT1A7Q9HAW7 530 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 UGT1A10Q9HAW8 530 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 UGT1A8Q9HAW9 530 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 RAB6BQ9NRW1 208 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 FETUBQ9UGM5 382 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 TEX264Q9Y6I9 313 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 IKBKGQ9Y6K9 419 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 FAM237BA0A1B0GVD1 139 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 NEBLO76041 1014 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 HAUS5O94927 633 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 INHBAP08476 426 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 NEK3P51956 506 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 CCNG1P51959 295 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 PPM1NQ8N819 430 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 FNIP1Q8TF40 1166 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 CDT1Q9H211 546 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 PTPRHQ9HD43 1115 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.27
DDX41-205ENST00000505081 GPR25O00155 361 aa16.7■□□□□ 0.26
DDX41-205ENST00000505081 TRAFD1O14545 582 aaPredicted RBP16.7■□□□□ 0.26
DDX41-205ENST00000505081 MED7O43513 233 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms