RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 RNF180Q86T96 592 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 GOLGA8TH3BQL2 631 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 CNTFP26441 200 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 ZNF177Q13360 481 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 DENND1BQ6P3S1 775 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 SPATA16Q9BXB7 569 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 HUNKP57058 714 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 CLCA2Q9UQC9 943 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 DGKIO75912 1065 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 RGS2P41220 211 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 AMHR2Q16671 573 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 AARS2Q5JTZ9 985 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 WLSQ5T9L3 541 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 TMEM154Q6P9G4 183 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC7A5P2Q9GIP4 190 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 PRG3Q9Y2Y8 225 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 KIF1CO43896 1103 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 VHLP40337 213 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 HSPA13P48723 471 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 GALNT4Q8N4A0 578 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 ARIH2O95376 493 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 RPLP2P05387 115 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 OCM2P0CE71 109 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 OCMP0CE72 109 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 NLRP9Q7RTR0 991 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 OTULINQ96BN8 352 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CDC42EP4Q9H3Q1 356 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CISHQ9NSE2 258 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC24A2Q9UI40 661 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 USP18Q9UMW8 372 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 H7C4K7 107 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 PCYT1AP49585 367 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 ORC1Q13415 861 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 ADCK1Q86TW2 530 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC47A2Q86VL8 602 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 ADGRF2Q8IZF7 708 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 TMEM176AQ96HP8 235 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 OSGEPQ9NPF4 335 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 VWA5AO00534 786 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CYB561D2O14569 222 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 B3GAT3O94766 335 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CPA2P48052 419 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 MRPS35P82673 323 aaKnown RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 C2CD6Q53TS8 623 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 HEY2Q9UBP5 337 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 VCAM1P19320 739 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 CDH18Q13634 790 aa17.11■□□□□ 0.33
PCDHA1-203ENST00000504120 THRAP10827 490 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 GCLCP48506 637 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 OVGP1Q12889 678 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 SV2AQ7L0J3 742 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 PLD3Q8IV08 490 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 FBXO25Q8TCJ0 367 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 SGF29Q96ES7 293 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 TMEM106CQ9BVX2 250 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 O00370 1275 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 ZBTB39O15060 712 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 THPOP40225 353 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 NUDT2P50583 147 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 DNERQ8NFT8 737 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC20A1Q8WUM9 679 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 APBB2Q92870 758 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 DSEQ9UL01 958 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 F5H5T6 163 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 FCGRTP55899 365 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 LAYNQ6UX15 382 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC26A11Q86WA9 606 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 PAFAH2Q99487 392 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 KCTD10Q9H3F6 313 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 IL1RL2Q9HB29 575 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 AP4E1Q9UPM8 1137 aa17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 DRG1Q9Y295 367 aaKnown RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
PCDHA1-203ENST00000504120 HIST2H2ACQ16777 129 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms