RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ATL2Q8NHH9 583 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 SYT15Q9BQS2 421 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 DSEQ9UL01 958 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 USP18Q9UMW8 372 aa23.08■■□□□ 1.29
PTPN13-205ENST00000502971 ARHGEF37A1IGU5 675 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 B3GAT3O94766 335 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 CYP11A1P05108 521 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 NPR3P17342 541 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 PCSK1P29120 753 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 KCNJ1P48048 391 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 CCDC14Q49A88 953 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 MDH1BQ5I0G3 518 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 KIAA0319Q5VV43 1072 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 DCLRE1AQ6PJP8 1040 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 GLB1LQ6UWU2 654 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 SLC26A9Q7LBE3 791 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 METTL23Q86XA0 190 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 TRIM31Q9BZY9 425 aa23.08■■□□□ 1.28
PTPN13-205ENST00000502971 C3orf70A6NLC5 250 aaPredicted RBP23.07■■□□□ 1.28
PTPN13-205ENST00000502971 GRAP2O75791 330 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 COL6A1P12109 1028 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 KDELR1P24390 212 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 SDC4P31431 198 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 SNX1Q13596 522 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 ALS2CLQ60I27 953 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 PAQR9Q6ZVX9 377 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 CMASQ8NFW8 434 aaPredicted RBP23.07■■□□□ 1.28
PTPN13-205ENST00000502971 LINC01599Q8WXQ3 324 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 KCTD13Q8WZ19 329 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 MED10Q9BTT4 135 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 NEUROG2Q9H2A3 272 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 CRTAC1Q9NQ79 661 aa23.07■■□□□ 1.28
PTPN13-205ENST00000502971 R3HDM2Q9Y2K5 976 aaKnown RBP23.07■■□□□ 1.28
PTPN13-205ENST00000502971 TDRD15B5MCY1 1934 aaKnown RBP23.07■■□□□ 1.28
PTPN13-205ENST00000502971 M0QZQ0 153 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 KRT10P13645 584 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 LCP1P13796 627 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 HSPA9P38646 679 aaKnown RBP23.06■■□□□ 1.28
PTPN13-205ENST00000502971 PPP1R7Q15435 360 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 TAZQ16635 292 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 DRICH1Q6PGQ1 229 aaPredicted RBP23.06■■□□□ 1.28
PTPN13-205ENST00000502971 CD300LGQ6UXG3 332 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 PIGZQ86VD9 579 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 ATG4AQ8WYN0 398 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 LRRC45Q96CN5 670 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 B3GNT5Q9BYG0 378 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 FAM129AQ9BZQ8 928 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 MED4Q9NPJ6 270 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 PCSK1NQ9UHG2 260 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 SNX24Q9Y343 169 aa23.06■■□□□ 1.28
PTPN13-205ENST00000502971 TIMM13Q9Y5L4 95 aaPredicted RBP23.06■■□□□ 1.28
PTPN13-205ENST00000502971 GAS8O95995 478 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 FAM200BP0CF97 657 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 LMNB2Q03252 620 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 TAF5Q15542 800 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 SMTNL2Q2TAL5 461 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 EFHC1Q5JVL4 640 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 KAZNQ674X7 775 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 TSEN2Q8NCE0 465 aaKnown RBP23.05■■□□□ 1.28
PTPN13-205ENST00000502971 URGCPQ8TCY9 931 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 ACSF2Q96CM8 615 aaPredicted RBP23.05■■□□□ 1.28
PTPN13-205ENST00000502971 GOLGA6BA6NDN3 693 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 CLDN5O00501 218 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 PRPSAP2O60256 369 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 OAS2P29728 719 aaKnown RBP23.05■■□□□ 1.28
PTPN13-205ENST00000502971 PTPN9P43378 593 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 C15orf59Q2T9L4 293 aaPredicted RBP23.05■■□□□ 1.28
PTPN13-205ENST00000502971 HSP90B2PQ58FF3 399 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 KCNT1Q5JUK3 1230 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 KCTD6Q8NC69 237 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 MYCBPAPQ8TBZ2 947 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 CFAP57Q96MR6 1250 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 ACBD6Q9BR61 282 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 TMEM106CQ9BVX2 250 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 ZDHHC18Q9NUE0 388 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 KANSL3Q9P2N6 904 aa23.05■■□□□ 1.28
PTPN13-205ENST00000502971 PITPNM1O00562 1244 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 HSF2BPO75031 334 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 RPL21P46778 160 aaKnown RBP23.04■■□□□ 1.28
PTPN13-205ENST00000502971 KRT17Q04695 432 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 PTK6Q13882 451 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 BOLA3Q53S33 107 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 NOMO2Q5JPE7 1267 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 CLEC20AQ6ZU45 233 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 RSPH1Q8WYR4 309 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 FMO2Q99518 471 aa23.04■■□□□ 1.28
PTPN13-205ENST00000502971 FRMD8P1Q9BZ68 369 aaPredicted RBP23.04■■□□□ 1.28
PTPN13-205ENST00000502971 ELAC1Q9H777 363 aaKnown RBP23.04■■□□□ 1.28
PTPN13-205ENST00000502971 LIASO43766 372 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 BRCC3P46736 316 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 ADCY2Q08462 1091 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 CLLU1OSQ5K130 101 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 SH3PXD2AQ5TCZ1 1133 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 CLEC4CQ8WTT0 213 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 FAM172AQ8WUF8 416 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 TEKT4Q8WW24 435 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 SUSD3Q96L08 255 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 CCDC114Q96M63 670 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 PEBP4Q96S96 227 aa23.03■■□□□ 1.28
PTPN13-205ENST00000502971 TBCBQ99426 244 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms