RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 CWF19L1Q69YN2 538 aaKnown RBP13.54□□□□□ -0.24
HSPG2-213ENST00000498495 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-213ENST00000498495 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 TTC16Q8NEE8 873 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 OVCA2Q8WZ82 227 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 JAKMIP2Q96AA8 810 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 SLC22A12Q96S37 553 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 PRRX2Q99811 253 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 IL37Q9NZH6 218 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 CCL26Q9Y258 94 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 SIT1Q9Y3P8 196 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 NCANO14594 1321 aa13.54□□□□□ -0.24
HSPG2-213ENST00000498495 PTPRDP23468 1912 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 KANSL1LA0AUZ9 987 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 MAN2B1O00754 1011 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 VDRP11473 427 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
HSPG2-213ENST00000498495 GCNT1Q02742 428 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 SGO2Q562F6 1265 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 HSP90AA4PQ58FG1 418 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 ZNF852Q6ZMS4 543 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 TMEM105Q8N8V8 129 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
HSPG2-213ENST00000498495 KAT5Q92993 513 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 NELL2Q99435 816 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 CRACR2AQ9BSW2 395 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 RNF38Q9H0F5 515 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 INTS2Q9H0H0 1204 aaKnown RBP13.53□□□□□ -0.24
HSPG2-213ENST00000498495 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-213ENST00000498495 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 HESX1Q9UBX0 185 aa13.53□□□□□ -0.24
HSPG2-213ENST00000498495 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
HSPG2-213ENST00000498495 FAM92AA1XBS5 289 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 FAM170BA6NMN3 283 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 HHLA1C9JL84 531 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 NCAM2O15394 837 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 PAEPP09466 180 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 GLULP15104 373 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 SLC9A1P19634 815 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 CD72P21854 359 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 NUBP1P53384 320 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 UBXN2BQ14CS0 331 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 VWA3BQ502W6 1294 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 SNX30Q5VWJ9 437 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 UBR7Q8N806 425 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 ANKRD52Q8NB46 1076 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 TTC8Q8TAM2 541 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 TUBGCP2Q9BSJ2 902 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 UBXN6Q9BZV1 441 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 TLR8Q9NR97 1041 aaKnown RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 TSPAN16Q9UKR8 245 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 NFE2L3Q9Y4A8 694 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 ARIH1Q9Y4X5 557 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-213ENST00000498495 PIAS3Q9Y6X2 628 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 GREB1Q4ZG55 1949 aa13.52□□□□□ -0.25
HSPG2-213ENST00000498495 DENND4CQ5VZ89 1909 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 ARNTLO00327 626 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 MBL2P11226 248 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 MFAP3P55082 362 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 MLLT6P55198 1093 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 SLC7A9P82251 487 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 KCNJ12Q14500 433 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 MTF1Q14872 753 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 STX1AQ16623 288 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 GOLGA7BQ2TAP0 167 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 SH3RF2Q8TEC5 729 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 FAM3CQ92520 227 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 NACA2Q9H009 215 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 NDST4Q9H3R1 872 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 C8orf33Q9H7E9 229 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-213ENST00000498495 LTB4R2Q9NPC1 389 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 GTSE1Q9NYZ3 720 aa13.51□□□□□ -0.25
HSPG2-213ENST00000498495 GMIPQ9P107 970 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms