RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CETPP11597 493 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 XRCC5P13010 732 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 EIF2S2P20042 333 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 RBMS1P29558 406 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CHRNA5P30532 468 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PRKCIP41743 596 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MCM2P49736 904 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KHKP50053 298 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 STAT5BP51692 787 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC12A2P55011 1212 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CDR2Q01850 454 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RELAQ04206 551 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 LRRC32Q14392 662 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KPNB1Q14974 876 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PPP2R5BQ15173 497 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SNCBQ16143 134 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 HNRNPA1L2Q32P51 320 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF542PQ5EBM4 170 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DEPDC1Q5TB30 811 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ANO7Q6IWH7 933 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GIMAP6Q6P9H5 292 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MTDHQ86UE4 582 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 GPSM1Q86YR5 675 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PASD1Q8IV76 773 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 OGFOD1Q8N543 542 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RFLNBQ8N5W9 214 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 BHLHE22Q8NFJ8 381 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 HMGCLL1Q8TB92 370 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DHX38Q92620 1227 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 NECAB3Q96P71 396 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CCDC85AQ96PX6 553 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 KIF2CQ99661 725 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SH3GL1Q99961 368 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DBNDD2Q9BQY9 259 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KRTAP4-9Q9BYQ8 210 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DEFB126Q9BYW3 111 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CRNKL1Q9BZJ0 848 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 ECHDC1Q9NTX5 307 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KLHL13Q9P2N7 655 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MSRAQ9UJ68 235 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ASB3Q9Y575 518 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCDHB5Q9Y5E4 795 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RNF123Q5XPI4 1314 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DHX29Q7Z478 1369 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 A0A0A0MRY4 1105 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 A0A1W2PRX2 142 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 WDR91A4D1P6 747 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 USP17L3A6NCW0 530 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 USP17L4A6NCW7 530 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MANSC4A6NHS7 340 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 SHISA8B8ZZ34 492 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 UBXN8O00124 270 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC19A2O60779 497 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SCO1O75880 301 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLU7O95391 586 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAP4K4O95819 1239 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PTTG1O95997 202 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TNNC2P02585 160 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ENO2P09104 434 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 GNAO1P09471 354 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PIM1P11309 404 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CYP2C9P11712 490 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PRF1P14222 555 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ETS1P14921 441 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CKMT2P17540 419 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 IGHMBP2P38935 993 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MC3RP41968 323 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CSE1LP55060 971 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CTSWP56202 376 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CDK5R2Q13319 367 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MED21Q13503 144 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZYXQ15942 572 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 INAQ16352 499 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KCNMB1Q16558 191 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 BAK1Q16611 211 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ESCO2Q56NI9 601 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SH2D4BQ5SQS7 431 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GPR158Q5T848 1215 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAP1SQ66K74 1059 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 USP17L2Q6R6M4 530 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 C16orf59Q7L2K0 433 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 LPCAT2Q7L5N7 544 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 USP17L1Q7RTZ2 530 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF438Q7Z4V0 828 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 WAPLQ7Z5K2 1190 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SDCCAG8Q86SQ7 713 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 FAM124AQ86V42 546 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SNX32Q86XE0 403 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CBWD2Q8IUF1 395 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MMAAQ8IVH4 418 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CCDC36Q8IYA8 594 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.53□□□□□ -2.16
XRN1-214ENST00000498077 FIBCD1Q8N539 461 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CERS5Q8N5B7 392 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 IGDCC4Q8TDY8 1250 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ASB5Q8WWX0 329 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 WFDC12Q8WWY7 111 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GCDHQ92947 438 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 RMDN1Q96DB5 314 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms