RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 UBLCP1Q8WVY7 318 aaPredicted RBP11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 CCDC114Q96M63 670 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 C11orf84Q9BUA3 381 aaPredicted RBP11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 PABPC3Q9H361 631 aaKnown RBP11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 TMBIM4Q9HC24 238 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 CYLDQ9NQC7 956 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 ASNSD1Q9NWL6 643 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 ASIC3Q9UHC3 531 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 FEZ2Q9UHY8 353 aaPredicted RBP11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 USP18Q9UMW8 372 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.63
PRPF4B-209ENST00000494674 CYB561D2O14569 222 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 MYCNP04198 464 aaPredicted RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 ITIH2P19823 946 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 SCNN1AP37088 669 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 SCNN1GP51170 649 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 PMS2P54278 862 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 VCPP55072 806 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 BYSLQ13895 437 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 CEP85LQ5SZL2 805 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 ZFYVE27Q5T4F4 411 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 SLC26A9Q7LBE3 791 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 PRUNE1Q86TP1 453 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 SH2D3CQ8N5H7 860 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 CFAP57Q96MR6 1250 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 PAAF1Q9BRP4 392 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 MTRF1LQ9UGC7 380 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
PRPF4B-209ENST00000494674 RNF8O76064 485 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ITGAVP06756 1048 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 THP07101 528 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ATF2P15336 505 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ACAT1P24752 427 aaKnown RBP11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 CHKAP35790 457 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 CLCNKBP51801 687 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ITGA8P53708 1063 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 CALCOCO2Q13137 446 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 CD300LGQ6UXG3 332 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ARCQ7LC44 396 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 HACE1Q8IYU2 909 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 GOLGA6L1Q8N7Z2 621 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 FAM76AQ8TAV0 307 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 HAUS1Q96CS2 278 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ATP6V1G3Q96LB4 118 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 SENP8Q96LD8 212 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 SAE1Q9UBE0 346 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-209ENST00000494674 A0A0U1RQF3 1178 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 XPO1O14980 1071 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CST8O60676 142 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SHOX2O60902 331 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 TRPA1O75762 1119 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CABYRO75952 493 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SHBGP04278 402 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 RARGP13631 454 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 PTPN1P18031 435 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 PTPN9P43378 593 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 VPS41P49754 854 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 RAB27AP51159 221 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 HDAC4P56524 1084 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ADCY1Q08828 1119 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 UPP1Q16831 310 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CDO1Q16878 200 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 KCTD16Q68DU8 428 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 RNF180Q86T96 592 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ZNF598Q86UK7 904 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CCDC89Q8N998 374 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 FAM172AQ8WUF8 416 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 HSPH1Q92598 858 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 HMGB1P1B2RPK0 211 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CLDN5O00501 218 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 RIPK2O43353 540 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 BEST1O76090 585 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ZSCAN5DPP0CG00 497 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ETS1P14921 441 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 PECAM1P16284 738 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 IL4RP24394 825 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SDC4P31431 198 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ADCY8P40145 1251 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 LMAN1P49257 510 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 DYNLT1P63172 113 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms