RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PDZD8Q8NEN9 1154 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 CYFIP2Q96F07 1278 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 ZFYVE19Q96K21 471 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 SRRTQ9BXP5 876 aaKnown RBP23.98■■□□□ 1.43
SNIP1-203ENST00000493916 NUP62CLQ9H1M0 184 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 MTF2Q9Y483 593 aaPredicted RBP23.98■■□□□ 1.43
SNIP1-203ENST00000493916 ANAPC1Q9H1A4 1944 aa23.98■■□□□ 1.43
SNIP1-203ENST00000493916 FAM92AA1XBS5 289 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 FAM170BA6NMN3 283 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 TCF3P15923 654 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 CD72P21854 359 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 TARSP26639 723 aaKnown RBP23.97■■□□□ 1.43
SNIP1-203ENST00000493916 ADORA2BP29275 332 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 USP4Q13107 963 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 C1orf228Q6PIY5 440 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 ARL14EPQ8N8R7 260 aaPredicted RBP23.97■■□□□ 1.43
SNIP1-203ENST00000493916 PATJQ8NI35 1801 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 RIN3Q8TB24 985 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 CYP2S1Q96SQ9 504 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 FAM83CQ9BQN1 747 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 C8orf33Q9H7E9 229 aaPredicted RBP23.97■■□□□ 1.43
SNIP1-203ENST00000493916 PNPLA8Q9NP80 782 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 ARHGAP26Q9UNA1 814 aa23.97■■□□□ 1.43
SNIP1-203ENST00000493916 BEST1O76090 585 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 OLFM2O95897 454 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 HDCP19113 662 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 TBXAS1P24557 533 aaPredicted RBP23.96■■□□□ 1.43
SNIP1-203ENST00000493916 MAGEA9P43362 315 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 MAP3K7CLP57077 242 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 YWHAEP62258 255 aaKnown RBP23.96■■□□□ 1.43
SNIP1-203ENST00000493916 CETN1Q12798 172 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 ZNF77Q15935 545 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 CLEC20AQ6ZU45 233 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 ZNF687Q8N1G0 1237 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 SLC4A11Q8NBS3 891 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 SCAMP5Q8TAC9 235 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 FBXO32Q969P5 355 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 CLDN23Q96B33 292 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 TMEM176AQ96HP8 235 aa23.96■■□□□ 1.43
SNIP1-203ENST00000493916 ZNF638Q14966 1978 aaKnown RBP23.96■■□□□ 1.43
SNIP1-203ENST00000493916 MIA3Q5JRA6 1907 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 OAS1P00973 400 aaKnown RBP23.95■■□□□ 1.42
SNIP1-203ENST00000493916 CCDC192P0DO97 292 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 RAD23BP54727 409 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 SLC7A9P82251 487 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 IFRD2Q12894 506 aaPredicted RBP23.95■■□□□ 1.42
SNIP1-203ENST00000493916 MTF1Q14872 753 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 ZNF394Q53GI3 561 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 SNX30Q5VWJ9 437 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 FAM3CQ92520 227 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 MED15Q96RN5 788 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 GTSE1Q9NYZ3 720 aa23.95■■□□□ 1.42
SNIP1-203ENST00000493916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.95■■□□□ 1.42
SNIP1-203ENST00000493916 HELZP42694 1942 aaKnown RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 NCAM2O15394 837 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 RPS9P46781 194 aaKnown RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 KPNA1P52294 538 aaPredicted RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 KCNH2Q12809 1159 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 PPP1R26Q5T8A7 1209 aaPredicted RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 CC2D1AQ6P1N0 951 aaPredicted RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 RALGPS2Q86X27 583 aaPredicted RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 UBR7Q8N806 425 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 LMO3Q8TAP4 145 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 HEXIM2Q96MH2 286 aaKnown RBP23.94■■□□□ 1.42
SNIP1-203ENST00000493916 FBXO44Q9H4M3 255 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 GKN1Q9NS71 199 aa23.94■■□□□ 1.42
SNIP1-203ENST00000493916 HHLA1C9JL84 531 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 SPECC1L-ADORA2AF8WAN1 911 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 H0Y858 1186 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 AFPP02771 609 aaKnown RBP23.93■■□□□ 1.42
SNIP1-203ENST00000493916 ZDHHC11BP0C7U3 371 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 CTHP32929 405 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 TUBP50607 506 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 TNK2Q07912 1038 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 FZD5Q13467 585 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 PDGFRLQ15198 375 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 ITPRIPL2Q3MIP1 535 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 ARHGAP17Q68EM7 881 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 KIAA1958Q8N8K9 716 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 SH3RF2Q8TEC5 729 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 NT5C1BQ96P26 610 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 DUSP16Q9BY84 665 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 HPS4Q9NQG7 708 aa23.93■■□□□ 1.42
SNIP1-203ENST00000493916 ABL1P00519 1130 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 SOX9P48436 509 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 LRMPQ12912 555 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 ANGPT1Q15389 498 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 OSCP1Q8WVF1 389 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 CNOT6LQ96LI5 555 aaKnown RBP23.92■■□□□ 1.42
SNIP1-203ENST00000493916 RNF38Q9H0F5 515 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 GMIPQ9P107 970 aa23.92■■□□□ 1.42
SNIP1-203ENST00000493916 NDRG2Q9UN36 371 aaKnown RBP23.92■■□□□ 1.42
SNIP1-203ENST00000493916 ZXDBP98169 803 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 RUNX3Q13761 415 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 DPCR1Q3MIW9 517 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 TRIM68Q6AZZ1 485 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 GPRIN1Q7Z2K8 1008 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 C1orf210Q8IVY1 113 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 ATOH1Q92858 354 aaPredicted RBP23.91■■□□□ 1.42
SNIP1-203ENST00000493916 EBF3Q9H4W6 596 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms