RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TKTL1P51854 596 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 SLC5A3P53794 718 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 C1QBPQ07021 282 aaKnown RBP20.42■□□□□ 0.86
USP39-218ENST00000493829 PTPROQ16827 1216 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 FAM183BPQ6ZVS7 135 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 SIX6OS1Q8N1H7 587 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 SCAMP5Q8TAC9 235 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 NDRG1Q92597 394 aaKnown RBP20.42■□□□□ 0.86
USP39-218ENST00000493829 FAM161BQ96MY7 647 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 SLC4A5Q9BY07 1137 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 LACRTQ9GZZ8 138 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 LZTFL1Q9NQ48 299 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.42■□□□□ 0.86
USP39-218ENST00000493829 CNOT8Q9UFF9 292 aaKnown RBP20.42■□□□□ 0.86
USP39-218ENST00000493829 FBXW11Q9UKB1 542 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 ZKSCAN5Q9Y2L8 839 aa20.42■□□□□ 0.86
USP39-218ENST00000493829 MYO16Q9Y6X6 1858 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 CALB1P05937 261 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 EPCAMP16422 314 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 NRIP1P48552 1158 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 RBM10P98175 930 aaKnown RBP20.41■□□□□ 0.86
USP39-218ENST00000493829 TWF1Q12792 350 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 MTMR3Q13615 1198 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 C10orf76Q5T2E6 689 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 OR6B2Q6IFH4 312 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 SCUBE3Q8IX30 993 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 KREMEN2Q8NCW0 462 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 C18orf8Q96DM3 657 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
USP39-218ENST00000493829 PIWIL1Q96J94 861 aaKnown RBP20.41■□□□□ 0.86
USP39-218ENST00000493829 C8orf48Q96LL4 319 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 TLE6Q9H808 572 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 INSL5Q9Y5Q6 135 aa20.41■□□□□ 0.86
USP39-218ENST00000493829 ANKRD62A6NC57 917 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 ABL1P00519 1130 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 RPL10AP62906 217 aaKnown RBP20.4■□□□□ 0.86
USP39-218ENST00000493829 LIN9Q5TKA1 542 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 PPP1R2P3Q6NXS1 205 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 XYLT1Q86Y38 959 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 STK32AQ8WU08 396 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 HSFY1Q96LI6 401 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 ULBP1Q9BZM6 244 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 MAN1C1Q9NR34 630 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 DUSP10Q9Y6W6 482 aa20.4■□□□□ 0.86
USP39-218ENST00000493829 PAPSS1O43252 624 aaPredicted RBP20.39■□□□□ 0.86
USP39-218ENST00000493829 C8AP07357 584 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 TMEM253P0C7T8 217 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.86
USP39-218ENST00000493829 ALDH1A3P47895 512 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 TUFMP49411 452 aaKnown RBP20.39■□□□□ 0.86
USP39-218ENST00000493829 GRIN2CQ14957 1233 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 DNAJC24Q6P3W2 148 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 LILRA6Q6PI73 481 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 TCEAL8Q8IYN2 117 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 KCTD13Q8WZ19 329 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 TRIM11Q96F44 468 aa20.39■□□□□ 0.86
USP39-218ENST00000493829 MAGED2Q9UNF1 606 aaPredicted RBP20.39■□□□□ 0.86
USP39-218ENST00000493829 MYO7AQ13402 2215 aa20.39■□□□□ 0.85
USP39-218ENST00000493829 SPDYE4A6NLX3 237 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 GRAP2O75791 330 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 USP17L7P0C7H9 530 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 ACADSBP45954 432 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 USP46P62068 366 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 GPC5P78333 572 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 FAM102AQ5T9C2 384 aaPredicted RBP20.38■□□□□ 0.85
USP39-218ENST00000493829 TMEM110Q86TL2 294 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 IGFLR1Q9H665 355 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 PNPLA8Q9NP80 782 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 METTL5Q9NRN9 209 aaKnown RBP20.38■□□□□ 0.85
USP39-218ENST00000493829 STRIP2Q9ULQ0 834 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 NCANO14594 1321 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 MACROD2A1Z1Q3 448 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 SLC38A8A6NNN8 435 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 TNFRSF10BO14763 440 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 MYBL1P10243 752 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 GABRB2P47870 512 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 KIF5AQ12840 1032 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 RAB41Q5JT25 222 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 OLFML1Q6UWY5 402 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 CCAR2Q8N163 923 aaKnown RBP20.38■□□□□ 0.85
USP39-218ENST00000493829 NUP93Q8N1F7 819 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 NUP85Q9BW27 656 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 CTTNBP2NLQ9P2B4 639 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 HCFC2Q9Y5Z7 792 aa20.38■□□□□ 0.85
USP39-218ENST00000493829 ZSCAN12O43309 604 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 ARHGAP25P42331 645 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 RPL34P49207 117 aaKnown RBP20.37■□□□□ 0.85
USP39-218ENST00000493829 SNX16P57768 344 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 VEPH1Q14D04 833 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 TAF5Q15542 800 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 ARHGAP29Q52LW3 1261 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 ZNF697Q5TEC3 545 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 DENND5BQ6ZUT9 1274 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 SLC22A17Q8WUG5 538 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 SELENOOQ9BVL4 669 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 UBXN6Q9BZV1 441 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 OSGEPQ9NPF4 335 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 INTUQ9ULD6 942 aa20.37■□□□□ 0.85
USP39-218ENST00000493829 GUCA1BQ9UMX6 200 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms