RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ST13P5Q8NFI4 369 aaPredicted RBP18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 SHKBP1Q8TBC3 707 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 SLC35F5Q8WV83 523 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 NECTIN4Q96NY8 510 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 ASB2Q96Q27 587 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 CAPN11Q9UMQ6 739 aa18.87■□□□□ 0.61
PDLIM7-208ENST00000493815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■□□□ 12.8
PDLIM7-208ENST00000493815 A0A1W2PQJ5 194 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 GABBR2O75899 941 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 SETSIPP0DME0 302 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 YWHAQP27348 245 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 CYP4F8P98187 520 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 TAF10Q12962 218 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 TEAD2Q15562 447 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 SFMBT2Q5VUG0 894 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 WDTC1Q8N5D0 677 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 NDRG1Q92597 394 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 RPGRIP1Q96KN7 1286 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 MYRFLQ96LU7 910 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 EDEM3Q9BZQ6 932 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 PDCL3Q9H2J4 239 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 ATXN3LQ9H3M9 355 aa18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 CHORDC1Q9UHD1 332 aaPredicted RBP18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 LUC7L2Q9Y383 392 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-208ENST00000493815 TADA3O75528 432 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 F11P03951 625 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 CHRNB2P17787 502 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PLA2G4AP47712 749 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PGFP49763 221 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 KIF11P52732 1056 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ZBED6P86452 979 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ASIC2Q16515 512 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PUS10Q3MIT2 529 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■□□□□ 9
PDLIM7-208ENST00000493815 C1orf131Q8NDD1 294 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 FGF13Q92913 245 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 TRMT2BQ96GJ1 504 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 CEP295NLQ96MC4 621 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 MYADMQ96S97 322 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 TTLL2Q9BWV7 592 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PNPLA8Q9NP80 782 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ST7Q9NRC1 585 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PCDHGC3Q9UN70 934 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ABL1P00519 1130 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 SKILP12757 684 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 LCP1P13796 627 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 FERP16591 822 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 GBP2P32456 591 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 TKTL1P51854 596 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 FMO1Q01740 532 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ADIGQ0VDE8 80 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ZNF397Q8NF99 534 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 MCRS1Q96EZ8 462 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ZSWIM3Q96MP5 696 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 PHF7Q9BWX1 381 aaPredicted RBP18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 GMIPQ9P107 970 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 TJP2Q9UDY2 1190 aa18.85■□□□□ 0.61
PDLIM7-208ENST00000493815 ZNF197O14709 1029 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 ADCY5O95622 1261 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 USP17L7P0C7H9 530 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 BMP1P13497 986 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 ADKP55263 362 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 CDR2Q01850 454 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 RAB41Q5JT25 222 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 SMYD5Q6GMV2 418 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 NPAS3Q8IXF0 933 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 LEMD2Q8NC56 503 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 UBXN6Q9BZV1 441 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 SEPT11Q9NVA2 429 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 IL37Q9NZH6 218 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 AIPL1Q9NZN9 384 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 UXTQ9UBK9 157 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 FAM50BQ9Y247 325 aa18.84■□□□□ 0.61
PDLIM7-208ENST00000493815 CDC25CP30307 473 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 TXNDC8Q6A555 127 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 CPA5Q8WXQ8 436 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 IQCDQ96DY2 449 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 SLITRK1Q96PX8 696 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 GCNAQ96QF7 691 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 ULBP1Q9BZM6 244 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 LHX5Q9H2C1 402 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 SLITRK6Q9H5Y7 841 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 HAUS4Q9H6D7 363 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 USP3Q9Y6I4 520 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 GREB1Q4ZG55 1949 aa18.83■□□□□ 0.61
PDLIM7-208ENST00000493815 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 C2CD4DB7Z1M9 353 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 KLHL30Q0D2K2 578 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 TBX2Q13207 712 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 PDCLQ13371 301 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 MEA1Q16626 185 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms