RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 SMPD4Q9NXE4 827 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
NFIA-213ENST00000493627 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.86
NFIA-213ENST00000493627 A8MXQ7 604 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 CLDN5O00501 218 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 GDF9O60383 454 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 PHACTR2O75167 634 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 ABL1P00519 1130 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 CYP17A1P05093 508 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 FAM163BP0C2L3 166 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 PTPN1P18031 435 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 ATICP31939 592 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 OPRD1P41143 372 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 RAP1GAPP47736 663 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 PPP3CCP48454 512 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 IFRD2Q12894 506 aaPredicted RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 DMC1Q14565 340 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 SF3A2Q15428 464 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 CCDC6Q16204 474 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 ZNF699Q32M78 642 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 AASDHQ4L235 1098 aaPredicted RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 TDRD10Q5VZ19 366 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 FILIP1Q7Z7B0 1213 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 GRAMD1CQ8IYS0 662 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 CEP57L1Q8IYX8 460 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 C12orf50Q8NA57 414 aaPredicted RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 PLEKHO2Q8TD55 490 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 ZNF516Q92618 1163 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 LINC00597Q9H2U6 94 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 SMYD3Q9H7B4 428 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 VRTNQ9H8Y1 702 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 PCDHGA5Q9Y5G8 931 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 CPQQ9Y646 472 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 PTPRDP23468 1912 aa9.7□□□□□ -0.86
NFIA-213ENST00000493627 HELZP42694 1942 aaKnown RBP9.7□□□□□ -0.86
NFIA-213ENST00000493627 LRRIQ3A6PVS8 624 aaPredicted RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 SLC9A3R1O14745 358 aaPredicted RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 ACTN4O43707 911 aaKnown RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 ATP8B3O60423 1300 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ADRB1P08588 477 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ZNF806P0C7X5 589 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 MPLP40238 635 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 LIMK1P53667 647 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 AP3M2P53677 418 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 NCOA4Q13772 614 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 PKP1Q13835 747 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ZNF638Q14966 1978 aaKnown RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 GAB4Q2WGN9 574 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 PLK5Q496M5 336 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 GREB1Q4ZG55 1949 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ZNF667Q5HYK9 610 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 PPM1JQ5JR12 505 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ATL3Q6DD88 541 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 SCARA5Q6ZMJ2 495 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 FAM35AQ86V20 835 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 NUP93Q8N1F7 819 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 KIAA1958Q8N8K9 716 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 KIAA0895Q8NCT3 520 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 PDZD8Q8NEN9 1154 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 TSTD1Q8NFU3 115 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 CCDC26Q8TAB7 109 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 USP33Q8TEY7 942 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ZC3H10Q96K80 434 aaKnown RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 RNF38Q9H0F5 515 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 EPG5Q9HCE0 2579 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 DMAP1Q9NPF5 467 aaPredicted RBP9.69□□□□□ -0.86
NFIA-213ENST00000493627 KRT82Q9NSB4 513 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 EXOC1Q9NV70 894 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 CFAP97Q9P2B7 532 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 SERTAD1Q9UHV2 236 aa9.69□□□□□ -0.86
NFIA-213ENST00000493627 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 KIAA1549LQ6ZVL6 1849 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 KLRC4O43908 158 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 RTN3O95197 1032 aaPredicted RBP9.68□□□□□ -0.86
NFIA-213ENST00000493627 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 MBL2P11226 248 aaPredicted RBP9.68□□□□□ -0.86
NFIA-213ENST00000493627 YWHAQP27348 245 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 SLC5A3P53794 718 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 CDH8P55286 799 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 SEC13P55735 322 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 CLDN10P78369 228 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 STK4Q13043 487 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 DHCR24Q15392 516 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 ELF2Q15723 593 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 PLA2G2CQ5R387 149 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 IL31Q6EBC2 164 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 ANO7Q6IWH7 933 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
NFIA-213ENST00000493627 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 OVCA2Q8WZ82 227 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 FBXO32Q969P5 355 aa9.68□□□□□ -0.86
NFIA-213ENST00000493627 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms