RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 HSP90B2PQ58FF3 399 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 KAZNQ674X7 775 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PIGZQ86VD9 579 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 ARFGAP1Q8N6T3 406 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 TSEN2Q8NCE0 465 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 ATG4AQ8WYN0 398 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 RAPGEF5Q92565 580 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 LRRC45Q96CN5 670 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 RUFY1Q96T51 708 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FMO2Q99518 471 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PAAF1Q9BRP4 392 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM129AQ9BZQ8 928 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 UBXN6Q9BZV1 441 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 NEUROG2Q9H2A3 272 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 CRTAC1Q9NQ79 661 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 KRT82Q9NSB4 513 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PCSK1NQ9UHG2 260 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FAM153AQ9UHL3 310 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 R3HDM2Q9Y2K5 976 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 PTPN22Q9Y2R2 807 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 SNX24Q9Y343 169 aa9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 ZNF638Q14966 1978 aaKnown RBP9.59□□□□□ -0.87
SMARCC1-208ENST00000492896 TET1Q8NFU7 2136 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 GOLGA6BA6NDN3 693 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 I3L4J1 428 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 M0QZQ0 153 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CLDN5O00501 218 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 PRPSAP2O60256 369 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 DAB1O75553 588 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 COL6A1P12109 1028 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CCL5P13501 91 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 KRT10P13645 584 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 TYMPP19971 482 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 KDELR1P24390 212 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 HSPA9P38646 679 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 PTPN9P43378 593 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 BRCC3P46736 316 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 RPL21P46778 160 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM189BP81408 668 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 LMNB2Q03252 620 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ADIGQ0VDE8 80 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 TAZQ16635 292 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CCDC142Q17RM4 750 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CCDC14Q49A88 953 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 PAN2Q504Q3 1202 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 NOMO2Q5JPE7 1267 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 EFHC1Q5JVL4 640 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CLLU1OSQ5K130 101 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 KIAA0319Q5VV43 1072 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ALS2CLQ60I27 953 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 DCLRE1AQ6PJP8 1040 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM43BQ6ZT52 329 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CLEC20AQ6ZU45 233 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ARCQ7LC44 396 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ANKS1BQ7Z6G8 1248 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 RTN4RL1Q86UN2 441 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 SIX6OS1Q8N1H7 587 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ATL2Q8NHH9 583 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 MYCBPAPQ8TBZ2 947 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM71BQ8TC56 605 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CLEC4CQ8WTT0 213 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM172AQ8WUF8 416 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 TEKT4Q8WW24 435 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 RSPH1Q8WYR4 309 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 KCTD13Q8WZ19 329 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 HSPH1Q92598 858 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 SEPT8Q92599 483 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 MYLPFQ96A32 169 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 SMARCD1Q96GM5 515 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 SUSD3Q96L08 255 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 CFAP57Q96MR6 1250 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 DEFB118Q96PH6 123 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 PEBP4Q96S96 227 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 B3GNT5Q9BYG0 378 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 LRRC4Q9HBW1 653 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 NGRNQ9NPE2 291 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 MED4Q9NPJ6 270 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 MTRF1LQ9UGC7 380 aaKnown RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 ASIC3Q9UHC3 531 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 OGDHLQ9ULD0 1010 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 TIMM13Q9Y5L4 95 aaPredicted RBP9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 TTC3P53804 2025 aa9.58□□□□□ -0.88
SMARCC1-208ENST00000492896 MYBPHLA2RUH7 354 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 C3orf70A6NLC5 250 aaPredicted RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 H3BQF6 201 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 TMEM189-UBE2V1I3L0A0 370 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 LIASO43766 372 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 NBNO60934 754 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 AP1G2O75843 785 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 FBXO21O94952 628 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ATF2P15336 505 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 CDH6P55285 790 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms