RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 BIRC3Q13489 604 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 CUL4BQ13620 913 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 PPM1JQ5JR12 505 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 RESP18Q5W5W9 173 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 ATL3Q6DD88 541 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 SPAG17Q6Q759 2223 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
MRPL55-231ENST00000492170 DDX1Q92499 740 aaKnown RBP16.32■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF516Q92618 1163 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 EZH1Q92800 747 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-231ENST00000492170 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 CPQQ9Y646 472 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 SDK1Q7Z5N4 2213 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 CLDN5O00501 218 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 RTN3O95197 1032 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-231ENST00000492170 OLFM2O95897 454 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 OAS1P00973 400 aaKnown RBP16.31■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF806P0C7X5 589 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 AP3M2P53677 418 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 CACNA2D1P54289 1103 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 ZXDBP98169 803 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 SF3A2Q15428 464 aaKnown RBP16.31■□□□□ 0.2
MRPL55-231ENST00000492170 ELF2Q15723 593 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 CCDC6Q16204 474 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 IL31Q6EBC2 164 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 FILIP1Q7Z7B0 1213 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 NUP93Q8N1F7 819 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 PDZD8Q8NEN9 1154 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 TSTD1Q8NFU3 115 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 ZC3H10Q96K80 434 aaKnown RBP16.31■□□□□ 0.2
MRPL55-231ENST00000492170 B3GNT5Q9BYG0 378 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 GZF1Q9H116 711 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-231ENST00000492170 SMYD3Q9H7B4 428 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 VRTNQ9H8Y1 702 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 SMPD4Q9NXE4 827 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
MRPL55-231ENST00000492170 CYP17A1P05093 508 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 ADRB1P08588 477 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 MBL2P11226 248 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-231ENST00000492170 YWHAQP27348 245 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 MPLP40238 635 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 OPRD1P41143 372 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 CASP4P49662 377 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 LIMK1P53667 647 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 NCOA4Q13772 614 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 PLK5Q496M5 336 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 GRAMD1CQ8IYS0 662 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 OVCA2Q8WZ82 227 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 TNIP3Q96KP6 325 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 RNF38Q9H0F5 515 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 CFAP97Q9P2B7 532 aa16.3■□□□□ 0.2
MRPL55-231ENST00000492170 LRRIQ3A6PVS8 624 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-231ENST00000492170 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 SLFN14P0C7P3 912 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 P4HA1P13674 534 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 KCNA4P22459 653 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 DGKEP52429 567 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 SEC13P55735 322 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 DHCR24Q15392 516 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 SCARA5Q6ZMJ2 495 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 PARD3BQ8TEW8 1205 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 SMARCD1Q96GM5 515 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 CNTNAP3BQ96NU0 1288 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 CNTNAP3Q9BZ76 1288 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 VPS45Q9NRW7 570 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 SERTAD1Q9UHV2 236 aa16.29■□□□□ 0.2
MRPL55-231ENST00000492170 TPRP12270 2363 aaKnown RBP16.28■□□□□ 0.2
MRPL55-231ENST00000492170 K7EQS6 105 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 KLRC4O43908 158 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 ADH1CP00326 375 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 EIF2DP41214 584 aaKnown RBP16.28■□□□□ 0.2
MRPL55-231ENST00000492170 CDH8P55286 799 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 C2orf27AQ580R0 203 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 PLA2G2CQ5R387 149 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 ADGRG2Q8IZP9 1017 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-231ENST00000492170 DMAP1Q9NPF5 467 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-231ENST00000492170 TBC1D14Q9P2M4 693 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 MMP17Q9ULZ9 603 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 KIAA1549LQ6ZVL6 1849 aa16.28■□□□□ 0.2
MRPL55-231ENST00000492170 EML5Q05BV3 1969 aa16.27■□□□□ 0.2
MRPL55-231ENST00000492170 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.2
MRPL55-231ENST00000492170 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
MRPL55-231ENST00000492170 DCLK1O15075 740 aa16.27■□□□□ 0.2
MRPL55-231ENST00000492170 ACTN4O43707 911 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms