RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SH3RF2Q8TEC5 729 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 OVCA2Q8WZ82 227 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 TAF4BQ92750 862 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 ATP2A3Q93084 1043 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 LOXL4Q96JB6 756 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 ZC3H10Q96K80 434 aaKnown RBP8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 P2RY13Q9BPV8 354 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 ZNF518BQ9C0D4 1074 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 SDCBP2Q9H190 292 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 CSNK1G1Q9HCP0 422 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 COMMD8Q9NX08 183 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 DUS2Q9NX74 493 aaKnown RBP8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 TRPM5Q9NZQ8 1165 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 EBF1Q9UH73 591 aa8.92□□□□□ -0.98
SMARCB1-207ENST00000491967 A8MXQ7 604 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 LEFTY2O00292 366 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 AKAP3O75969 853 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ASS1P00966 412 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 NR3C1P04150 777 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 CKMP06732 381 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 HSP90AA1P07900 732 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 OPRD1P41143 372 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ATXN1P54253 815 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 CDH8P55286 799 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 TNNC1P63316 161 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 CYP27A1Q02318 531 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 DPYDQ12882 1025 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 TAF10Q12962 218 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 TRPC3Q13507 836 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 NCOA4Q13772 614 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 SIM2Q14190 667 aaPredicted RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 KCNB1Q14721 858 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 CSRP2Q16527 193 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 SGSM1Q2NKQ1 1148 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ZNF667Q5HYK9 610 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 NAIF1Q69YI7 327 aaPredicted RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 DGLUCYQ7Z3D6 616 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 UNC93AQ86WB7 457 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 FUKQ8N0W3 1084 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 NUP93Q8N1F7 819 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ZMIZ2Q8NF64 920 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 GAB3Q8WWW8 586 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 SMYD3Q9H7B4 428 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 NXF1Q9UBU9 619 aaKnown RBP8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 GMEB2Q9UKD1 530 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 WNT6Q9Y6F9 365 aa8.91□□□□□ -0.98
SMARCB1-207ENST00000491967 GON4LQ3T8J9 2241 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 NUP205Q92621 2012 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 ACACBO00763 2458 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 MED19A0JLT2 244 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 K7EQS6 105 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 CLDN5O00501 218 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 GREM1O60565 184 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 RNF40O75150 1001 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 RTN3O95197 1032 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 ANXA13P27216 316 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 YWHAQP27348 245 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 EIF2DP41214 584 aaKnown RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 ASPAP45381 313 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 IFNAR2P48551 515 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 NDUFA8P51970 172 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 KRT85P78386 507 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 INCA1Q0VD86 236 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 NR1H3Q13133 447 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 SRSF5Q13243 272 aaKnown RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 ZNF699Q32M78 642 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 PHTF2Q8N3S3 785 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 GUF1Q8N442 669 aaKnown RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 FAM160A2Q8N612 972 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 USP33Q8TEY7 942 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 CD101Q93033 1021 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 EXOC4Q96A65 974 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 FAXDC2Q96IV6 333 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 CHAMP1Q96JM3 812 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 TNIP3Q96KP6 325 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 SLITRK1Q96PX8 696 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 HINFPQ9BQA5 517 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 SCAND2PQ9GZW5 306 aaPredicted RBP8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 TRPC7Q9HCX4 862 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 EXOC1Q9NV70 894 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 RAB23Q9ULC3 237 aa8.9□□□□□ -0.98
SMARCB1-207ENST00000491967 PLXND1Q9Y4D7 1925 aa8.9□□□□□ -0.99
SMARCB1-207ENST00000491967 PI4KAP42356 2102 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 E2F8A0AVK6 867 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 HHLA1C9JL84 531 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC9A3R1O14745 358 aaPredicted RBP8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC30A4O14863 429 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 TM4SF5O14894 197 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 COCHO43405 550 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 PHACTR2O75167 634 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 BEST1O76090 585 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 NFATC1O95644 943 aa8.89□□□□□ -0.99
SMARCB1-207ENST00000491967 CYP17A1P05093 508 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms