RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 HHIPQ96QV1 700 aa22.31■■□□□ 1.16
SYNE4-205ENST00000490730 SEMA4GQ9NTN9 838 aa22.31■■□□□ 1.16
SYNE4-205ENST00000490730 CPQQ9Y646 472 aa22.31■■□□□ 1.16
SYNE4-205ENST00000490730 MYO16Q9Y6X6 1858 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 SCAMP3O14828 347 aaKnown RBP22.3■■□□□ 1.16
SYNE4-205ENST00000490730 RPP40O75818 363 aaKnown RBP22.3■■□□□ 1.16
SYNE4-205ENST00000490730 NR3C1P04150 777 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 TCF3P15923 654 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 PFKLP17858 780 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 CMA1P23946 247 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 PPP3CCP48454 512 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 ATXN1P54253 815 aaKnown RBP22.3■■□□□ 1.16
SYNE4-205ENST00000490730 ZXDBP98169 803 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 CEP135Q66GS9 1140 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 RNF38Q9H0F5 515 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 USP25Q9UHP3 1055 aa22.3■■□□□ 1.16
SYNE4-205ENST00000490730 LRP3O75074 770 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 MBL2P11226 248 aaPredicted RBP22.29■■□□□ 1.16
SYNE4-205ENST00000490730 YWHAQP27348 245 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 DLG4P78352 724 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 KRT85P78386 507 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 FAM35AQ86V20 835 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 NUP93Q8N1F7 819 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 GAB3Q8WWW8 586 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 FBXO32Q969P5 355 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 TNIP3Q96KP6 325 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 KCTD10Q9H3F6 313 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 DMAC2Q9NW81 257 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 KIAA1549LQ6ZVL6 1849 aa22.29■■□□□ 1.16
SYNE4-205ENST00000490730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.28■■□□□ 1.16
SYNE4-205ENST00000490730 AXIN1O15169 862 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 VNN1O95497 513 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 C4BPAP04003 597 aaKnown RBP22.28■■□□□ 1.16
SYNE4-205ENST00000490730 RPN1P04843 607 aaKnown RBP22.28■■□□□ 1.16
SYNE4-205ENST00000490730 P4HA1P13674 534 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 SEC13P55735 322 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 SLC7A9P82251 487 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 ORC1Q13415 861 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 PRR23CQ6ZRP0 262 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 SLC9A9Q8IVB4 645 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 EZH1Q92800 747 aaPredicted RBP22.28■■□□□ 1.16
SYNE4-205ENST00000490730 ACDQ96AP0 544 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 KCNK16Q96T55 309 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 SDCBP2Q9H190 292 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 VRTNQ9H8Y1 702 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 CFAP97Q9P2B7 532 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 FRMD4BQ9Y2L6 1034 aa22.28■■□□□ 1.16
SYNE4-205ENST00000490730 SPAG17Q6Q759 2223 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 NCOR2Q9Y618 2525 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 EML5Q05BV3 1969 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 DCDC2BA2VCK2 349 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 PDXKO00764 312 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CALUO43852 315 aaPredicted RBP22.27■■□□□ 1.16
SYNE4-205ENST00000490730 RTN3O95197 1032 aaPredicted RBP22.27■■□□□ 1.16
SYNE4-205ENST00000490730 OAS1P00973 400 aaKnown RBP22.27■■□□□ 1.16
SYNE4-205ENST00000490730 SYKP43405 635 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CLDN10P78369 228 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CSRP2Q16527 193 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CACNA2D4Q7Z3S7 1137 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 ACOT1Q86TX2 421 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 KBTBD6Q86V97 674 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CAMKK1Q8N5S9 505 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 CCDC47Q96A33 483 aaKnown RBP22.27■■□□□ 1.16
SYNE4-205ENST00000490730 RTKNQ9BST9 563 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 DMAP1Q9NPF5 467 aaPredicted RBP22.27■■□□□ 1.16
SYNE4-205ENST00000490730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.27■■□□□ 1.162e-7■■■■■ 181.9
SYNE4-205ENST00000490730 KRT82Q9NSB4 513 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 HPSEQ9Y251 543 aa22.27■■□□□ 1.16
SYNE4-205ENST00000490730 MYH10P35580 1976 aa22.27■■□□□ 1.15
SYNE4-205ENST00000490730 SDK1Q7Z5N4 2213 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 CCDC163A0A0D9SF12 145 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 AP1G2O75843 785 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 OLFM2O95897 454 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 CYP17A1P05093 508 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 MYL1P05976 194 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 PRR29P0C7W0 189 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 PIK3CAP42336 1068 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 NDUFA8P51970 172 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 DMC1Q14565 340 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 CCDC6Q16204 474 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 SGSM1Q2NKQ1 1148 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 C2orf27AQ580R0 203 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 SYT13Q7L8C5 426 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 PDZD8Q8NEN9 1154 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 SCAMP5Q8TAC9 235 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 SMARCD1Q96GM5 515 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 ARRDC1-AS1Q9H2J1 176 aa22.26■■□□□ 1.15
SYNE4-205ENST00000490730 CHORDC1Q9UHD1 332 aaPredicted RBP22.26■■□□□ 1.15
SYNE4-205ENST00000490730 SLC9A3R1O14745 358 aaPredicted RBP22.25■■□□□ 1.15
SYNE4-205ENST00000490730 APBB3O95704 486 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 CCDC130P13994 396 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 OPRD1P41143 372 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 SLC5A3P53794 718 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 ZACNQ401N2 412 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 SPOPLQ6IQ16 392 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 DDX42Q86XP3 938 aaKnown RBP eCLIP22.25■■□□□ 1.15
SYNE4-205ENST00000490730 CCDC26Q8TAB7 109 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 NETO1Q8TDF5 533 aa22.25■■□□□ 1.15
SYNE4-205ENST00000490730 TMC2Q8TDI7 906 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms